CI01000055_03903278_03905608


Basic Information

Item Value
gene id CI01000055_03903278_03905608
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 3903090 ~ 3905734 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_03903278_03905608.mRNA
TTATAAATATTTTGTATTTGTTTCAATACCACAACATTTATTTGCAGTCAGTTTCTTTTAACATTACCATAATAACAAATTATTATTTTATGAATCTAGAATATAATTGTTTCTTTAAATATTGTTTTATAATTAAAATAACAATTTAAATTTGTAAAACATTTATAAAATTCTTTGCTTTGCAAAAAATGTATGAGAGACTGTCAGACAATGCAATCAAACTCAACACCCTTTCATTATCAAATCGTGTCAAGCTGTCACTTAACAACTTAAGTGATATAAATTGCAAAATGTCAGGCACATACACACAAACAAAAAAATCCAAAACGCCGGTGAAAATAAAACGCAAAAATAAAACAAGTGCAGAAGGAGCCAAAGAGCGAATAATCCGATCCGACCGGGGAGAGTCTAGCAATGGCCAGTGCTCCTCTCAACCCCGCGGTCCTGACTGTCGCGCCCCGCGAAAAATTTTGATGTGGAAAAACAAGCGACGGCAAACGCATGAAAGCCAAAGGAAAAAATTAAAAGACGGCTCTGACATTTATAAATTAAAGAGGTCTGTACTTGGCAGGGCACTGAGCTTTTCGACTTGCGAGAGCATCTTTGGAGACATCACACTGAAAAAAACACCATATAACACCATAAAAATTGTAGTAAGCTCAAGCAATATAAAAACAACTAGAAGACTTATCAATTTACAACAGAATTTCGAGCACATCATTATTATTATAATTTAACAGCATGTTCTGCCGCTCTCCGCGGTGCAGAGCCGGCTGCCTCAGACCACACAGACAGCTCGGATTTTTCACAGCTAAATCACAGCCGCGCATTCAGATATGAAAACTGCTAAACACTCATTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_03903278_03905608.mRNA True 863 mRNA 0.36 3 3903090 3905734

Neighbor

gene id symbol gene type direction distance location
CI01000055_03795753_03805149 ALDH18A1, P5CS coding upstream 96311 3795703 ~ 3806779 (+)
CI01000055_03752947_03764493 SLC35F3A coding upstream 138045 3752947 ~ 3765045 (+)
CI01000055_03745295_03748598 KCNK1A coding upstream 153864 3743485 ~ 3749226 (+)
CI01000055_03717618_03733174 THBS2, THBS2B coding upstream 169493 3716053 ~ 3733597 (+)
CI01000055_03667192_03685378 NRAP coding upstream 217197 3666736 ~ 3685893 (+)
CI01000055_03909546_03911972 NA coding downstream 3133 3908867 ~ 3912179 (+)
CI01000055_04023182_04033823 CADPS2 coding downstream 117448 4023182 ~ 4033895 (+)
CI01000055_04035172_04094367 CADPS2 coding downstream 129363 4035097 ~ 4094656 (+)
CI01000055_04097751_04100235 FEZF1 coding downstream 191053 4096787 ~ 4100495 (+)
CI01000055_04104413_04124421 AASS coding downstream 198679 4104413 ~ 4124421 (+)
G239599 NA non-coding upstream 195086 3707467 ~ 3708004 (+)
G239598 NA non-coding upstream 197865 3705024 ~ 3705225 (+)
G239565 NA non-coding upstream 278085 3624783 ~ 3625005 (+)
G239546 NA non-coding upstream 321980 3580901 ~ 3581110 (+)
G239535 NA non-coding upstream 384960 3509117 ~ 3518130 (+)
G239748 NA non-coding downstream 220793 4126527 ~ 4127026 (+)
G239754 NA non-coding downstream 343784 4249518 ~ 4250917 (+)
G239799 NA non-coding downstream 353596 4259330 ~ 4261799 (+)
CI01000055_04265119_04272728 NA non-coding downstream 367262 4265119 ~ 4273913 (+)
G239804 NA non-coding downstream 368561 4274295 ~ 4274524 (+)
CI01000055_02542526_02542861 NA other upstream 1358972 2542216 ~ 2544118 (+)
G238534 NA other upstream 2233846 1668410 ~ 1669244 (+)
G237840 NA other upstream 3483158 418925 ~ 419932 (+)
G237680 NA other upstream 3881928 20902 ~ 21162 (+)
G239761 NA other downstream 256516 4162250 ~ 4213402 (+)
G239755 NA other downstream 348476 4254210 ~ 4255092 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1259758 5162990 ~ 5166647 (+)
G240099 NA other downstream 1630784 5525472 ~ 5544153 (+)

Expression


Co-expression Network