CI01000055_04023182_04033823 (CADPS2)


Basic Information

Item Value
gene id CI01000055_04023182_04033823
gene name CADPS2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 4023182 ~ 4033895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_04023182_04033823.mRNA
GTGGGGCACACAAGGAGATTTCACCACCACACACCCCCTGCCCGCGGTCAAAGTCAAACTCTTCACCGAAAGCACTGGAGTCCTGGCTCTGGAGGACAAAGAGCTGGGCAGGGTGGTTCTTCACCCCACCACAAACGGGCCCAAAACGGCAGAGTTTCACAAGATGGTAGTGCCTAAGAACAGCCAAGATGTGGATCTGAAAATCAAACTGGCGGTCCGCATGGACAAGCCCCCCAACATGAAGCATAGCGGGTCCTATGATCCTCTTTTGAGATTCGTAAGACCAAAATCATACCATTTCACTCTTAGGTTTTGTCCAATTACCCATATACCCACACACATCCACCAAAACAAACACCTGATGACTGTCCCAGTGCATAGTGAGCGAAGTCGGCTGGAAAGTGCCCGCGGCGCGCCCGTTCACCCGGAGGTCGTCCTGCCCGCCGTTAGCCAGCCATTGTTGCCGTCTAAATGGGATCATGTGTATCAGAAAGGTGTCGGAGAGTATCTTTACGCCTTAGGCCAGAGAGTCTGGAAGAGATGGAAAAGGAGATATTTTGTGCTTGTTCAGGTGAGTCAGTACACATTTGCCATGTGCAGTTACCGGGAGAAGAAGTCAGAGCCGCATGAGCTGATGCAGTTGGACGGATATACGGTAGATTACTCCGATCCACAGCCAGGTCTTCAGGGAGGCAGAGCGTTCTTCAGCGCTGTTCGAGAAGGTGATCTGGTGGTATTCGCCAGCAGTGACGATCAGGACCGCGCTCTTTGGGTCCAGGCCATGTACCGCGCCACAGGCCAATCCTACAAACCAGTAGCGCCCGCCCAGAACCAGCAGAACTGCAGAGGAGGAAACGCCCAAAAAGATGCCCCTGTGTCCTTACTCAATCTCAGCTCTGAGCTGTCTCTCTGCTTTATACTCAACAGTGACCGGCGTCCTCTCATAGACAGATCTGTGTTTTTCGTCAGAGGCTCGGGTTTCATATCCGAGCGTGTGAACACCAATGTCCTGTCCTGCTTCATTAGTCTTTCCAACTCTGGCTGGTTTCACTTGAAGCGACCCGCCAGGCCGTACCTGCGATATCGCCCCCGCCGTTGTGTTGATACCTGTCATAAAGCTCCGTCCGCCTTGTCAAGATATGTCAGATGGATGTGACTGCTGGCGTGACCGCCTGCTTCTCCTGGACCTGGAAGCACACGAGGCGCGTTCCCGACCCCTTCAGCTGGA

Function

symbol description
cadps2 Predicted to enable metal ion binding activity. Predicted to be involved in exocytosis and positive regulation of exocytosis. Predicted to act upstream of or within dense core granule exocytosis and synaptic vesicle exocytosis. Predicted to be active in glutamatergic synapse. Is expressed in hatching gland; nervous system; otic vesicle; pronephric duct; and trigeminal placode. Orthologous to human CADPS2 (calcium dependent secretion activator 2).

GO: NA

KEGG:

id description
K19933 CADPS; calcium-dependent secretion activator

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_04023182_04033823.mRNA True 1228 mRNA 0.54 8 4023182 4033895

Neighbor

gene id symbol gene type direction distance location
CI01000055_03909546_03911972 NA coding upstream 111003 3908867 ~ 3912179 (+)
CI01000055_03903278_03905608 NA coding upstream 117448 3903090 ~ 3905734 (+)
CI01000055_03795753_03805149 ALDH18A1, P5CS coding upstream 216403 3795703 ~ 3806779 (+)
CI01000055_03752947_03764493 SLC35F3A coding upstream 258137 3752947 ~ 3765045 (+)
CI01000055_03745295_03748598 KCNK1A coding upstream 273956 3743485 ~ 3749226 (+)
CI01000055_04035172_04094367 CADPS2 coding downstream 1202 4035097 ~ 4094656 (+)
CI01000055_04097751_04100235 FEZF1 coding downstream 62892 4096787 ~ 4100495 (+)
CI01000055_04104413_04124421 AASS coding downstream 70518 4104413 ~ 4124421 (+)
CI01000055_04220373_04228785 SLC15A5 coding downstream 186478 4220373 ~ 4228906 (+)
CI01000055_04229735_04231409 NA coding downstream 195840 4229735 ~ 4231602 (+)
G239643 NA non-coding upstream 57219 3880366 ~ 3965963 (+)
G239646 NA non-coding upstream 97323 3869732 ~ 3925859 (+)
G239599 NA non-coding upstream 315178 3707467 ~ 3708004 (+)
G239598 NA non-coding upstream 317957 3705024 ~ 3705225 (+)
G239565 NA non-coding upstream 398177 3624783 ~ 3625005 (+)
G239748 NA non-coding downstream 92632 4126527 ~ 4127026 (+)
G239754 NA non-coding downstream 215623 4249518 ~ 4250917 (+)
G239799 NA non-coding downstream 225435 4259330 ~ 4261799 (+)
CI01000055_04265119_04272728 NA non-coding downstream 239101 4265119 ~ 4273913 (+)
G239804 NA non-coding downstream 240400 4274295 ~ 4274524 (+)
CI01000055_02542526_02542861 NA other upstream 1479064 2542216 ~ 2544118 (+)
G238534 NA other upstream 2353938 1668410 ~ 1669244 (+)
G237840 NA other upstream 3603250 418925 ~ 419932 (+)
G237680 NA other upstream 4002020 20902 ~ 21162 (+)
G239761 NA other downstream 128355 4162250 ~ 4213402 (+)
G239755 NA other downstream 220315 4254210 ~ 4255092 (+)
CI01000055_05163240_05166231 PIGY, PYURF other downstream 1131597 5162990 ~ 5166647 (+)
G240099 NA other downstream 1502623 5525472 ~ 5544153 (+)

Expression


Co-expression Network