XLOC_009981 (si:ch211-197h24.8)


Basic Information

Item Value
gene id XLOC_009981
gene name si:ch211-197h24.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 27593698 ~ 27602512 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019877
GTTTATGGTTTGGCCGCCAGACTTTTTACACTACAATACACACAGAGCAAGATTACTACACGTTGTGCAACAAGGCATAAGACTCAGCAGTGACTTAATCTGAAAAGCTGCTTTTCTCAACCTGAAGAAATGATTCGCATCAATGAGAGGAGATGCAAGGAACGGTTCTACGAGGGGGAGCACCTAAAGATTTGGGATCTCCAAAGATATAGAATACCGAACAACTACATCTATAACTCAGTCCCAGCTTATCCTGAGGGAGTGGAATTTCACATTTCAAGGCTTCGGCATGACACTAACCTCCGAGGATACCATGGCATCTGTAATTCTTCAGGGTTTAAAAAGCCGACAGAAAGCGACTCACCTGAACGTGATCTTGTATGGTGGAGCCCAGACATTTCCAGACGTGATATTACAGCTGCTGAGGAGCAATACTTGGATAAGGAAGAGATTGAGTACCCAGAGAAACAATTCCTGCACAAATTTACATCTTCCCCAGCCTTTCTGTCCTCCTCTCGGCTGGGGAACTTCCGTTTCAGCATGCCAATCCATGACTTGTTTGAGAGCTACAAGGAACAGTTCTGTGCAGACCTAAGGCCCCACATTCGCATTTTTGAGACTGTGGTGTATAAGCAGGAAGTGATGTATTCTATTGTGATTCACTCACCTTCTGCAAGAGACCTGTTTTCGAAGTATCCTCTGCTCAAGGATACTCCCAATGCAGTATGTGTGTTTCGTCATGGCAACATTATCTGGCGTCCACAGGCAATGAGTAAAAGACACAGTTTCCGACTGTCTTGTAACATGCAAGCTATCCGGATAGCAACAGCGTACAGGGAAGATTACGTGTGGGACAACATTGGAGTGGCATTTCATGTTCCACATGGAAAAACCTTGAGCTTCACTAAGAAAACTCTGACTAAGAGTTTAAGACTCTGTAAAGGAGCTGAACCAAAAAGTCACAATGAAGAGTTTGTGACATGTGAGTTTGACCTGATCAGACCATAGAGTGAATATGCCAAATGACCCATTACTGCATTGCTTTCTCcttttgttttcacattttatttgcattgtttTCTCTTATTTTAGTGTGTGTAGAATGTCTAAGTGGAAGCATCTGTTTGTGAATTTCAAAGTATTGTATGAGTGGAATCTCCTCTCATTCTGTTCCTGATTTAGTCTGCAGAGATATTCTAACTACACAGAAAAAGATAGAGGGAAAAAGATTTCTTCATTATGTAAGATAGACGTTTTTATTCCACACTTTAATTGAACCAGTCACTGTTAAATTGAAATGTAGAAGTTAAGAAGTTATTTAAAAGTTATAGAGGCTATAAATACAGcactcagcataattgagtacaccccattttgaaaatgaatatttgtatccatttctcagtgattataggcaatgtaatttgttgcatttaaacaaaacagttattGATTAGTTATTGATTagtattaattagttattaacaagagttattaacaagagttattaatcatatatataaatatttattaaaataatatttagtcaccaaacatatttagaaattgaaagataatacaattaaattcaagcaaaatattgcctCTTGTTTCTTCGtcttttttaaattagtatttaatatttttctataatatttgggtgtgctagtttttggaccgctATCGtacgttattttgttagataacctccagatttggtttcagtactgactaatctaatgtttatgcacaaatataatattgtatagcttactattaaaaatatatgaatttaaaagatttgtgaggggtgtacttttatatgctgagcactgtctcTTAATGCATATATATTGTATTACTATACATTggtaacacaaaaataaaacaaatcctacAAAACAAATAGTGGTCTAATGTGCCCCCAACGCAAATCCTATGCATTATTGTTTATAAGTATTACAACTGAAAAAAGAATGagtgttcatttcattttttatcatgtacactgaaaaatgtggttgatgttttttttaacaaccaTTTCACTATTTTGAGAATATGTTGATGTTTTTCCATGTTGCCTAAATAAACCACAGATATGAGGAAATTATTTGTGGCatactttatttaatgtttttacctaacttatgtttttttttttaggaaacttGCAGACAAAAATTATGTTTCTTAATCTGTTTTGAATAACTCCCTGTGACATACTTCTTAAATAAATGCCTCAAAAT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-207 No description available

Ensembl:

ensembl_id ENSDARG00000094881

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019877 True 2249 mRNA 0.35 2 27593698 27602512

Neighbor

gene id symbol gene type direction distance location
XLOC_009980 tmem67 coding upstream 12210 27564270 ~ 27581488 (+)
XLOC_009979 si:ch211-197h24.6 coding upstream 34802 27543308 ~ 27558896 (+)
XLOC_009978 invs coding upstream 90996 27442549 ~ 27502702 (+)
XLOC_009977 CR848817.1 coding upstream 177886 27415697 ~ 27415812 (+)
XLOC_009976 stx17 coding upstream 188238 27383717 ~ 27405460 (+)
XLOC_009982 si:ch211-197h24.9 coding downstream 1227 27603739 ~ 27609172 (+)
XLOC_009983 glipr2l coding downstream 12477 27614989 ~ 27622183 (+)
XLOC_009984 NA coding downstream 237415 27839927 ~ 27873367 (+)
XLOC_009985 znf804b coding downstream 355296 27957808 ~ 27998856 (+)
XLOC_009986 NA coding downstream 447042 28049554 ~ 28050028 (+)
XLOC_009973 LO017763.1 non-coding upstream 386901 27206669 ~ 27206797 (+)
XLOC_009964 BX537166.1 non-coding upstream 949872 26640677 ~ 26643826 (+)
XLOC_009961 NA non-coding upstream 1059941 26531777 ~ 26533757 (+)
XLOC_009960 NA non-coding upstream 1082589 26509385 ~ 26511109 (+)
XLOC_009987 NA non-coding downstream 667503 28270015 ~ 28371330 (+)
XLOC_009989 CR936250.1 non-coding downstream 785534 28388046 ~ 28388163 (+)
XLOC_009994 NA non-coding downstream 1057883 28660395 ~ 28667333 (+)

Expression


Co-expression Network