CI01000055_05176060_05176484


Basic Information

Item Value
gene id CI01000055_05176060_05176484
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 5175772 ~ 5176633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_05176060_05176484.mRNA
CTATAAAAGGAGCTCACCCTGTGAACTGTGAACCAACTCTAATGAACTGATAGACTGATGCACGAACCTGTTACTCAATAACAGCAGTGGTGAGTTGAGTATAAACTCTGTTGTTGCTTTATTTAAAATCTTACCTACTAATATCTTTAGTTCAATATAGCTAATTTTGTTGCATTTATAAAATAATGATTAGGACATTAACGCATTTATCTTTTAATTCACAGGTTCATAAAATGGTTTCCAGCATCAGTCTTGGATTTTTGGAGAAAACAGTTGTATTTTTCTCCATCTGTATATTATTCTATTCAACAAATGCCGATAGCAAGCCATTGAGCAAACGGGCTATCAATGAAGTCCAGCTAATGCATAACCTCGGGGTACATAAACATGTTGAACTGAGGCAAGACTGGCTTCAGACGAAACTGAGGGAAATCCACACGGCCTCAGTCAAGAACACAGACGCAGAGAGAACAGCACTTCTTCCAGACATCATTTCCAAACTCAAGGATCTAAATCCAAGGGAAGCTGAAGATATCATTGCCGTTTTGGAAAAACTTATGAACCCATCGTAAAAACAGAATTTGATGCCTATTAATGTGGACTATACTCAGGGCCGGACTGAAGTCAACTCTATTAACAATATTTATTTTTTCTATACGCAAACTATTTATATTTGTATGTAGTTTTCCAGGTTTTTTTTTGGCGGCTAAGCCGTGTAACA

Function

NR:

description
parathyroid hormone precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_05176060_05176484.mRNA False 721 mRNA 0.37 2 5175827 5176633

Neighbor

gene id symbol gene type direction distance location
CI01000055_05163240_05166231 PIGY, PYURF coding upstream 9199 5162990 ~ 5166647 (+)
CI01000055_05121603_05155153 GALNT18B, GALNT18A, GALNT18 coding upstream 20674 5121603 ~ 5155153 (+)
CI01000055_05086576_05086973 NA coding upstream 88446 5086026 ~ 5087381 (+)
CI01000055_05047161_05054848 VAC14 coding upstream 120378 5046159 ~ 5055449 (+)
CI01000055_04948850_04952489 NA coding upstream 223193 4948624 ~ 4952634 (+)
CI01000055_05183333_05195895 BTBD10B, BTBD10, BTBD10A coding downstream 6700 5183333 ~ 5196570 (+)
CI01000055_05212820_05215358 BORCS5 coding downstream 34838 5211471 ~ 5216143 (+)
CI01000055_05216403_05221104 NA coding downstream 39567 5216200 ~ 5221170 (+)
CI01000055_05263543_05300250 TMTC3 coding downstream 86614 5263247 ~ 5300649 (+)
CI01000055_05517350_05524400 NA coding downstream 340717 5517350 ~ 5524620 (+)
G240143 NA non-coding upstream 6498 5168979 ~ 5169329 (+)
G240071 NA non-coding upstream 16812 5158732 ~ 5159015 (+)
G240068 NA non-coding upstream 17550 5157917 ~ 5158277 (+)
G240116 NA non-coding upstream 93081 5082532 ~ 5082746 (+)
G240154 NA non-coding downstream 56181 5232814 ~ 5233313 (+)
G240163 NA non-coding downstream 70001 5246634 ~ 5251328 (+)
G240171 NA non-coding downstream 140653 5317286 ~ 5317495 (+)
G240176 NA non-coding downstream 149820 5326453 ~ 5327130 (+)
G240177 NA non-coding downstream 150751 5327384 ~ 5327704 (+)
CI01000055_04265119_04272728 NA other upstream 903112 4265119 ~ 4273913 (+)
G239755 NA other upstream 920735 4254210 ~ 4255092 (+)
G239761 NA other upstream 962425 4162250 ~ 4213402 (+)
CI01000055_02542526_02542861 NA other upstream 2631709 2542216 ~ 2544118 (+)
G240099 NA other downstream 359885 5525472 ~ 5544153 (+)
CI01000055_05614889_05616453 NA other downstream 437745 5614065 ~ 5617591 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other downstream 910192 6087034 ~ 6088759 (+)
G240344 NA other downstream 987227 6163860 ~ 6164011 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other downstream 1157691 6310117 ~ 6334801 (+)

Expression


Co-expression Network