CI01000055_05794130_05798164


Basic Information

Item Value
gene id CI01000055_05794130_05798164
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 5794094 ~ 5798164 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_05794130_05798164.mRNA
ATGAGTCCCGGTCCACTTAGTGGACAGTGTGTTGAAGCCATGCTGAGAATTTCCAGGCCTATCCAGCTCTTCTGGAGGCAGATGAGGCAAAAATTCACCTCTTTTGACAAAGAACGCACTGGAAAGATCTCTCTTCAGGACTTCAGAAAGTACATGATCCCTGTGATTGCAACACTCTGTTTCGCAATAGTAGAGCGTTGCCAAATCAGTGCTAATGACTGGGCCCTCATGTTAGTTATTGCACCTGCACTGCGTAACCTCAGGAATTCATACAGTATGTTGAAGAACATGCAGGAGTCTGATAAAGAATGGAATATCTCTTTTGCCGGCTGTGGATTTCTGATGGCTTACTACTGTGGAGTCTATTGCTGTTTATTCGAACAGGCCCAGTTTCTTCTTAAAGGGGTGACAAAGATTTGTGGGGCTTCATCTGGTGCTCTTATGGGAGCAATAATAGCATGCCAAATGTCCCCAGCCAAATGCTGTGAAAATTTGCTGGAAATGTCCAGAGAGGCTCGGAAAGGCACTCTGGGTGCTGTGCATCCCTCTTTCAACCTACTGAAGATAGTACGAAACTTCTTGAGCCGAGACCTGCCTGATGACGCACACCTACTCGCCAGCGGACGGCTGTATGTGTCACTCACACGAGTGTCCGATGGGAAAAATGTGTTGGTGTCTGAGTTTGACAGCAAAGAAGATCTCATTCAGGCTCTGATTTGTAGCTGCTTTTATCCGCTGTATTGTGGTGTGATGCCTCCACGCTATCATGGAATAAGGTATGCAGACGGAGCATTGAGTGATAACATGCCTTTCTCTAGTCTGAGAAACACAATCACTATCTCCCCTTTTTCCGGAGAGAGCGACATCAGTCCTTACGGAAACGCTTTTTATTTCCATGAAATATACTACAATAACGTCAGCATTCATATCAACTTCATTAATGCACACCGAGTGGTCATTGCATTTTTCCCTCCAGAACCAGAGGTCTTGGCTGAGATGTGTCAAAATGGATATAAGGATGCTTTCCTTTTTTTACAAGAAAATAATCCAATTTTGTTTTGCGTACCAGAACTCCTGAAGCTCAGATCGCCGTTGCCAGAGTTATGGGATCATAATCCAACATCTAAGAAATATAGTAGTAAAAACAAGCCAACAATGACTGGGAATTCTAAAAGTATCCTTCCAGAATCCATCAAGAAAGTTATTTACGTACACAGAAATGGCCAACTCTTCATCAAGACCCTTCACCTTCAAACCGAACTCACTGACCAGCACCACCTCTTGGTCTTCATCTTCTGATACACTGCATAATTACTATTGTTTACAAATATTAAA

Function

NR:

description
adipose triglyceride lipase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_05794130_05798164.mRNA True 1335 mRNA 0.43 8 5794094 5798164

Neighbor

gene id symbol gene type direction distance location
CI01000055_05760514_05771720 NT5DC3 coding downstream 22067 5760395 ~ 5772280 (-)
CI01000055_05752747_05757839 PARIETOPSIN coding downstream 36002 5751980 ~ 5758092 (-)
CI01000055_05750004_05751342 NA coding downstream 42417 5750004 ~ 5751677 (-)
CI01000055_05718689_05727278 FBXL13 coding downstream 66816 5718666 ~ 5727278 (-)
CI01000055_05711945_05712570 NA coding downstream 81524 5711521 ~ 5712668 (-)
CI01000055_05800423_05807271 EFCAB6 coding upstream 2259 5800423 ~ 5807271 (-)
CI01000055_05810206_05834127 CACNA2D4 coding upstream 12042 5810206 ~ 5834127 (-)
CI01000055_05863574_05870891 ABHD2, ABHD2B coding upstream 64592 5862756 ~ 5871134 (-)
CI01000055_05925014_05930723 NA coding upstream 126798 5924962 ~ 5931911 (-)
CI01000055_05993097_06007190 MAP1AB coding upstream 194296 5992460 ~ 6007190 (-)
G241625 NA non-coding downstream 34999 5758215 ~ 5759095 (-)
G241634 NA non-coding downstream 40016 5753585 ~ 5754078 (-)
G241620 NA non-coding downstream 54308 5737726 ~ 5739786 (-)
G241655 NA non-coding upstream 9910 5808074 ~ 5808348 (-)
G241656 NA non-coding upstream 54885 5853049 ~ 5853471 (-)
G241678 NA non-coding upstream 109266 5907430 ~ 5907652 (-)
G241688 NA non-coding upstream 143128 5941292 ~ 5945511 (-)
G241652 NA non-coding upstream 161973 5960137 ~ 5960767 (-)
G241542 NA other downstream 228311 5561343 ~ 5565783 (-)
CI01000055_05338403_05341971 NA other downstream 441917 5338403 ~ 5341971 (-)
CI01000055_04744063_04763284 FAM19A5, FAM19A5B other downstream 1013826 4743706 ~ 4764067 (-)
CI01000055_03918168_03965674 TCF7L2 other downstream 1828074 3911302 ~ 3966460 (-)
G240975 NA other downstream 2060099 3717651 ~ 3733995 (-)
G241646 NA other upstream 44030 5842194 ~ 5847572 (-)
CI01000055_06036788_06037622 CARTPT, CART2 other upstream 238420 6036472 ~ 6037728 (-)

Expression


Co-expression Network