Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000055_06087070_06088629 |
| gene name | ETFRF1, LYRM5, LYRM5B |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 6087034 ~ 6088759 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| lyrm5b | Predicted to be involved in respiratory electron transport chain. Predicted to be active in mitochondrion. Orthologous to human ETFRF1 (electron transfer flavoprotein regulatory factor 1). |
| etfrf1 | Involved in respiratory electron transport chain. Located in mitochondrion. |
| id | name | namespace |
|---|---|---|
| GO:0005575 | cellular_component | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000055_06087070_06088629.mRNA | False | 374 | mRNA | 0.41 | 2 | 6087070 | 6088748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000055_06076584_06085051 | NEDD1 | coding | upstream | 1401 | 6076584 ~ 6085669 (+) |
| CI01000055_06072755_06075308 | SH3GL3B, SH3GL3 | coding | upstream | 11557 | 6072755 ~ 6075513 (+) |
| CI01000055_06054137_06069292 | GLSL | coding | upstream | 17604 | 6054137 ~ 6069466 (+) |
| CI01000055_05946358_05975922 | PPIP5K1, PPIP5K1A, PPIP5K1B | coding | upstream | 111148 | 5946358 ~ 5975922 (+) |
| CI01000055_05916161_05919605 | HAPLN3 | coding | upstream | 166977 | 5916115 ~ 5920093 (+) |
| CI01000055_06143884_06145039 | NA | coding | downstream | 54037 | 6142785 ~ 6145423 (+) |
| CI01000055_06148933_06151962 | NA | coding | downstream | 59936 | 6148684 ~ 6152205 (+) |
| CI01000055_06154806_06161718 | NA | coding | downstream | 66058 | 6154806 ~ 6162076 (+) |
| CI01000055_06164325_06174472 | MXG, MXD, MX2, MX, MX1 | coding | downstream | 75577 | 6164325 ~ 6174763 (+) |
| CI01000055_06177831_06186773 | MXG | coding | downstream | 89083 | 6177831 ~ 6186773 (+) |
| G240407 | NA | non-coding | upstream | 49302 | 6036455 ~ 6037768 (+) |
| G240328 | NA | non-coding | upstream | 62787 | 5986590 ~ 6024283 (+) |
| G240392 | NA | non-coding | upstream | 100502 | 5985419 ~ 5986568 (+) |
| G240391 | NA | non-coding | upstream | 101659 | 5984732 ~ 5985411 (+) |
| G240323 | NA | non-coding | upstream | 124074 | 5907818 ~ 5962996 (+) |
| G240423 | NA | non-coding | downstream | 16849 | 6105597 ~ 6106102 (+) |
| G240429 | NA | non-coding | downstream | 23240 | 6111988 ~ 6117168 (+) |
| G240431 | NA | non-coding | downstream | 30170 | 6118918 ~ 6119154 (+) |
| G240432 | NA | non-coding | downstream | 30796 | 6119544 ~ 6119784 (+) |
| G240433 | NA | non-coding | downstream | 31806 | 6120554 ~ 6123682 (+) |
| CI01000055_05614889_05616453 | NA | other | upstream | 469479 | 5614065 ~ 5617591 (+) |
| G240099 | NA | other | upstream | 543258 | 5525472 ~ 5544153 (+) |
| CI01000055_05163240_05166231 | PIGY, PYURF | other | upstream | 920423 | 5162990 ~ 5166647 (+) |
| CI01000055_04265119_04272728 | NA | other | upstream | 1814355 | 4265119 ~ 4273913 (+) |
| G239755 | NA | other | upstream | 1831978 | 4254210 ~ 4255092 (+) |
| G240344 | NA | other | downstream | 75112 | 6163860 ~ 6164011 (+) |
| CI01000055_06310117_06334586 | GRAMD4B, GRAMD4 | other | downstream | 245576 | 6310117 ~ 6334801 (+) |
