CI01000055_06191356_06221464


Basic Information

Item Value
gene id CI01000055_06191356_06221464
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 6191175 ~ 6221822 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_06191356_06221464.mRNA
CCATAAAAATTGGGTGTTTAAGTAAGGAAACACCTGGGGTATGTAACCAGGTTACTTGTTTTTTGACTGACTCTAATCTTTGTTGCTCTATTACTATCTTTAACAGTATCCATGAGACTTGTAGCTTAGTAACCTTGCTTCCCCTTTCTGGTACTGCAGAATCTCTCTGTTTTCTGTCACTATGGCTAGTGCTGCCTCACTAGTCTTTAAAGGCCTCTTGAATGAGGATAAAGCGACTATTAAATGTCTTGCTGTCAAGCTGACTCAGAATCTTGTTGATCATATCAAAAAATCACTGCCACAGCTCAATGAGCAGATCAAAAATCGGTTGTGGGACGTGAGGAATGAGCTCAAGGAGTGTGAGGCTGGACCACCAGAAGATCTTAAGGGAGCCAAACAATTCCTCACTGAAACCATAAAAAGATTCAATGATCAAATCAACTCCTTATCATCAGGAGAAGTGATGAGTGAGGAAAATTTGTTTGTCCAGCTCCGGGCTGAATTCAAGGAGTGGAGTGATCATCTTAACAGTACAAAGACATCCTACAGCAGTGCTCATTACGATAATGACAATGTTGAGCATTCTCAAAATAGAAGTCAGAAAATGAAGGGAGAAGTTCACAGTCTTTTAGAAGAGAGGATTCGTCCATACATTGATCTGATCGACACTCTGCGGTCAGTTGGCATTCACAAGGACTTGGCATTACCGACTATTGCAGTGATCGGAGACCAGAGTTCTGGAAAAAGCTCTGTGTTAGAAGCGATTTCTGGTGTTGCATTACCAAGAGGAAGCGGAATTGTCACCAGATGTCCACTAGAGCTGAGGCTGAAGAAGGTAACAGGTGGAGTCAGTTGGAAGGCTGTTCTATCTTACCGTGATAAGAAAACTGAATTCGTGGATTCATCATTCGTTGGAAACCACGTAGAAGCAGCCCAGAATGAGCTGGCAGGAAAAGGGGTAGGAATATGTGATGACCTCATCACTTTAGAGGTCATGTCACCAGATGTGTGTGACCTCACACTGATCGATCTACCTGGAATTGCCCGAGTCCCAGTTAAAGGACAACCAGAGGATATTGGAAAACAGATCAAAAGTCTGATAACAAAGTTCATTCAGATGCCAGAGACTATAAACATGGTAGTGGTGCCTTGTAACACTGACATTGCAACAACAGAAGCATTAAAAATGGCACAAGAAGTAGATCCTGAGGGCAAAAGAACTATCGCCATTTTGACCAAGCCAGATCTCATTGACAAGGGAACAGAGAAGAACATTCTGGACATTGTCCACAACAAAGTGATTCCCCTCCGCAAAGGTTACGTCATGGTGAAGTGTAGAGGACAACAGCAGATCAATGAGAAAATTCCTCTGGAGGAAGCGACACAAATGGAGAGAGATTTCTTCCAAAAGCATAACGATTTCAGATGCCTCTTGAGTGAGGATAAAGCGACTGTTAAATGTCTTGCAACCAAACTGACTCAGCATCTTGTTGATCATATCAAAATCTTAACAAGATTCAATGATCAAATCAAGTCCTTATCATCAGGAGAGCTGATCATTAAGGAAAATTTGTTTGTCCAGCTTCGGGCTGAATATAAGGAGTGGAATGATCGTCTTAATGACACAAAGAAATCTTTTAAAAATTTGATTGAAGAGAGGATAGCATGTAGCCAGGATTACAGAGGGAGGGAACTGCTCGGCTTCTGCAACTACAAAATGTTTGAGGAGGTTCTGCAGAAGCATGTGGCCAAACTTAAAGAACCAGCCATCGACTTACTCAACACCATCAAAGACATCATCATCAAGCAGTTCATTGATGTAGTGAATCAATGTTTCCAGAAATACCCTCTTCTTCTAGACATCACTACGGACAAAATTCACAACATTCAATCAATCCAGCAAGAGAAGGCAGAGCAGAGGATCTCAGAGCAGTTTGAAATGGAAAACATGATCTACACTCAAGATTCCATCTACTTGAACGCCCTAAATGAGATGAGGCCCAAAGAGATGTTTATAAAAACCGAAGAGTCATTTTCAGAAGATCAGTTGCCTGTCTTTGATGTAAAGAGCAAGTACAGTGAAATGCTGCAGTCGTATTATGAGATTGTGGTGCAGCGGATGGCTGACCAACTACCCATGATAATATCCCTTTTCATGCTGAAACAGACTGCTCAGCTCCTGTCTACTGACATGCTGGGTTTACTGGACGGGGCAAATGTGAGCGAGCTCTTGTTTGAGGACTCTGAGGTCAGCATAAGGCGCAGAGACCTACGAGCTCGCCTGGGCCGTTTGAGTATCGGTCAGGAAAAAATTAGCAATTTTGTCTGAGCAATGTACTGACTAGAGGAAATGCTGACCAGATGTGTATCAGTATACTTTAATGTGGCATTTGGTCTTAAAATGACAGCAGCCTATTATACCCACCTGCTGCTCTGTGTCATTATTGTGAATTAAACAAAAGAAAAAATAACTTACTGCTCTTGACTGAATAATGTTTTATAGCTTTAATATGAATACATTTAAATTTAAATTCACAGCTGAAGTGAAATAAATGCAATATTTGACTAATGGGTCAATGACATATAAGGATTTTCGACAGGCCAATTTTAAAATACAATAGCAGTAGATATGAAATTTTTTTGTTCAAACATTAAGAATGTTGTGTACACATACTGTAAATTCATAA

Function

NR:

description
Mx protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_06191356_06221464.mRNA False 2687 mRNA 0.41 16 6191175 6221822

Neighbor

gene id symbol gene type direction distance location
CI01000055_06177831_06186773 MXG coding upstream 4402 6177831 ~ 6186773 (+)
CI01000055_06164325_06174472 MXG, MXD, MX2, MX, MX1 coding upstream 16412 6164325 ~ 6174763 (+)
CI01000055_06154806_06161718 NA coding upstream 29099 6154806 ~ 6162076 (+)
CI01000055_06148933_06151962 NA coding upstream 38970 6148684 ~ 6152205 (+)
CI01000055_06143884_06145039 NA coding upstream 45752 6142785 ~ 6145423 (+)
CI01000055_06233829_06238021 NA coding downstream 12007 6233829 ~ 6238021 (+)
CI01000055_06238643_06245138 NA coding downstream 16821 6238643 ~ 6245317 (+)
CI01000055_06247679_06298687 CELSR1B coding downstream 25857 6247679 ~ 6299580 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 coding downstream 88295 6310117 ~ 6334801 (+)
CI01000055_06349198_06350625 KCNA6A coding downstream 126589 6348411 ~ 6351516 (+)
G240450 NA non-coding upstream 27504 6163361 ~ 6163671 (+)
G240444 NA non-coding upstream 55035 6135903 ~ 6136140 (+)
G240433 NA non-coding upstream 67493 6120554 ~ 6123682 (+)
G240432 NA non-coding upstream 71391 6119544 ~ 6119784 (+)
G240431 NA non-coding upstream 72021 6118918 ~ 6119154 (+)
G240358 NA non-coding downstream 109509 6331331 ~ 6333548 (+)
G240472 NA non-coding downstream 178171 6399993 ~ 6400807 (+)
G240473 NA non-coding downstream 179479 6401301 ~ 6401914 (+)
G240479 NA non-coding downstream 191032 6412854 ~ 6413389 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other upstream 102416 6087034 ~ 6088759 (+)
CI01000055_05614889_05616453 NA other upstream 573584 5614065 ~ 5617591 (+)
G240099 NA other upstream 647363 5525472 ~ 5544153 (+)
CI01000055_05163240_05166231 PIGY, PYURF other upstream 1024528 5162990 ~ 5166647 (+)
CI01000055_04265119_04272728 NA other upstream 1918460 4265119 ~ 4273913 (+)

Expression


Co-expression Network