XLOC_009991 (nmt2)


Basic Information

Item Value
gene id XLOC_009991
gene name nmt2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 28578352 ~ 28591541 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019888
CGGTGCTGTTTTCCGTCGTTTTTATTGAGTGGTTTCGTCGTGAGGATTTGCAGCAGATTCATCCATGATGGCGGAGGACAGCGAGTCCGCGGCCAGCCAGCAGAGCCTGGAGCTGGACGACCAGGACACCTGCGGCATCGATGGAGACAACGAGGAGGAAAATGAGCACATGCAGGGGAGTCCTGGTGGTGATCTTGGtgcaaagaagaaaaagaagaagcaaAAGAGAAAGAAGGAGAAGCCAAGCTCAGGAGGAACCAAGTCTGACTCTGCCTCTGATTCTCAGGAGATAAAGAACCCTGCCATTCCCATGCAGAAACTGCAGGACATTCAGAGAGCTATGGAGCTCCTGTCCACCTGTCAAGGTCCAGCCAAAAACATAGACGAGGCCACAAAGCACAAGTACCAGTTCTGGGACACTCAACCTGTGCCCAAACTCAATGAGGTGGTGACAACACATGGACCAATTGAGCCTGATAAAGAAAATATCAGACAAGAGCCATATTCCCTCCCACAGGGTTTTATGTGGGACACGCTGGACCTTAGCAATGCTGAAGTGCTAAAGGAATTGTACACTTTGCTGAATGAAAATTATGTTGAGGACGATGACAACATGTTTAGATTTGATTATTCTCCTAATTTTCTAAAATGGGCGTTGCGTCCACCAGGTTGGCTGCCCCATTGGCACTGTGGTGTCAGGGTCTCCTCTAATAAGAAGCTGGTGGGATTCATCAGTGCAATTCCTGCTGACATCCATATCTATGACACGTTGAAGAGGATGGTGGAGATTAACTTCTTGTGTGTGCATAAAAAATTGCGCTCAAAGCGTGTTGCTCCTGTGCTAATCCGAGAGATCACGCGGCGGGTCAATTTAGAGGGAATTTTCCAGGCCGTGTATACTGCTGGTGTGGTGCTGCCCAAACCTGTATCCACATGCAGATATTGGCATCGCTCTCTAAACCCCAGGAAGCTTGTGGAGGTGAAGTTTTCCCACCTCAGCAGAAACATGACACTACAGCGGACAATGAAGCTCTACAGATTACCTGATAGCACTCGTACCCCTGGTTTGCGGACGATGGGAGACAGGGATGTGAAGCAAGTGACAGCACTGCTGCAGAAACACCTGAGCCAGTTCCACCTGCGGCCTGTGATGGGGGAAGAAGAGGTGAAGCACTGGTTTCTGCCTCAGGAGAACATCATTGACACTTTCGTAGTGGAGGGTTCTGGCGGGATGCTAACGGACTTCATCAGTTTCTACACCTTGCCATCCACAGTGATGCATCATCCACTGCACAAAAGCCTGAAGGCCGCTTATTCCTTTTACAATGTCCATACAGAGACGCCGCTCATAGACCTGATGAATGATGCTCTCATCTTAGCCAAACTGAAAGGTTTTGATGTTTTTAATGCGCTGGATCTAATGGACAATAAGAATTTCTTGGAAAAGCTCAAGTTTGGAATTGGCGATGGTAACCTGCAGTATTACCTGTACAACTGGAAATGCCCTCCCATGGACCCAGAGAAAGTTGGCCTTGTTTTACAGTAACTGGCTGCTGCTTGTTGGATGCCGACTGATTTCAGAGGTCCACCTTGAATTCTCAGACTTGGACGTAATCGATATAAAGAGGAAAAACTGAcatccattcaaagtgaatgagtTCTGTTGTGCAGCTCTCTTAGGTCTTGTTCCAGTTCCTGAGGGCTTTCCCTCCTTTCTCTTTGTCTTTGACTCTCTTTCTGAGAATGTGAGAAACATTTATCAAGGTCAAACACATCTACAAgctgcacatacatacacacacatgcagatacacacacatacacaaccgtAGTGTTTATTTTCCTCAACATGCAATCTGTCTCCTCTCTCAGAACATGTTTATTCCCAtggtttttgtctttttgttcatttgttttgtacTATGAAGGAGTGTTGATACATTTGTGTGAATTAGCAAGCTGTACATTTAATGCCAGATATTTATTACGTATTGTGAGGTTTACAACGGAACAGGAACATGGGTCGAAATCCAAAGTCTTTTGTATGGAGCTGCCTTTGAATTCATACAGCATTCTGAGTTTCTGTCTGTTTGCGGAGCGAGTAAATGGTTACACGTGTGGAGGAATGTATTGCGTTTTGAAGCACAACATCAACTTGTTTATAAAAGGGCCGGACTGCTCTGAGGTGCATTTGTAAGAATATGATGTTTTGTTTTAGGGTTTGTGTGTCCAAAAGAAACATTTCGAATTTTGAA
>TCONS_00019889
AGTGTATTTTAAACCAGCATACTAATATTATAGCTCGTTAATTATGTAGTGGGAAAACAGCGCTGCAATTAATGCATTAGGGAGACATTCCTGAGATATGCCGATATTTACTTAATGCAGCGTTTAATTTAAACTTGTTAGCTGTAGCTAGCTTGATTTTAatgttaaagcatttattaaagcAATCGAATAAGTCATCCAGTCCTTTCTCTGCTCTATTTCGGAGTCCTGGTGGTGATCTTGGtgc

Function

symbol description
nmt2 Predicted to enable glycylpeptide N-tetradecanoyltransferase activity. Predicted to be involved in N-terminal peptidyl-glycine N-myristoylation. Predicted to act upstream of or within N-terminal protein myristoylation. Predicted to be located in membrane. Predicted to be active in cytoplasm. Orthologous to human NMT2 (N-myristoyltransferase 2).

GO:

id name namespace
GO:0006499 N-terminal protein myristoylation biological_process
GO:0018008 N-terminal peptidyl-glycine N-myristoylation biological_process
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-717 Predicted to enable glycylpeptide N-tetradecanoyltransferase activity. Predicted to be involved in N-terminal peptidyl-glycine N-myristoylation. Predicted to act upstream of or within N-terminal protein myristoylation. Predicted to be located in membrane. Predicted to be active in cytoplasm. Orthologous to human NMT2 (N-myristoyltransferase 2).

Ensembl:

ensembl_id ENSDARG00000021808

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019888 False 2255 mRNA 0.46 12 28578352 28591541
TCONS_00019889 True 247 mRNA 0.36 2 28578648 28579313

Neighbor

gene id symbol gene type direction distance location
XLOC_009990 fam171a1 coding upstream 3563 28547157 ~ 28574789 (+)
XLOC_009988 itga8 coding upstream 65492 28383758 ~ 28512860 (+)
XLOC_009989 CR936250.1 coding upstream 190189 28388046 ~ 28388163 (+)
XLOC_009987 NA coding upstream 207022 28270015 ~ 28371330 (+)
XLOC_009986 NA coding upstream 528324 28049554 ~ 28050028 (+)
XLOC_009992 acbd7 coding downstream 5014 28596555 ~ 28599328 (+)
XLOC_009993 crot coding downstream 10433 28601974 ~ 28627568 (+)
XLOC_009994 NA coding downstream 68854 28660395 ~ 28667333 (+)
XLOC_009995 dcst2 coding downstream 135842 28727383 ~ 28754071 (+)
XLOC_009996 si:dkey-24i24.3 coding downstream 136806 28728347 ~ 28737174 (+)
XLOC_009984 NA non-coding upstream 704985 27839927 ~ 27873367 (+)
XLOC_009977 CR848817.1 non-coding upstream 1162540 27415697 ~ 27415812 (+)
XLOC_010005 NA non-coding downstream 619821 29211362 ~ 29230847 (+)
XLOC_010006 NA non-coding downstream 654339 29245880 ~ 29250848 (+)
XLOC_010014 NA non-coding downstream 999578 29591119 ~ 29600668 (+)
XLOC_010018 NA non-coding downstream 1130086 29721627 ~ 29813252 (+)

Expression


Co-expression Network