CI01000055_06443549_06446405 (BPGM)


Basic Information

Item Value
gene id CI01000055_06443549_06446405
gene name BPGM
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 6443549 ~ 6446441 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000055_06443549_06446405.mRNA
ATGTGCATCATTTTCAGGCTTCCATACTGCCTCTTCTGGATGTCCAAATACAAACTCTTCCTGCTCCGGCATGGGGAGGGGGCCTGGAACAAGGAGAACCGCTTCTGCAGCTGGGTTGACCAGAAACTGAGCGAGAACGGGGTGGTGGAAGCCCAAGAATGCGGCAGGCTCCTGAAAGAGAAGGGGTATCAATTCGACCAGGTTTTTACCTCCATACTGAGCCGTTCCATCCAGACAGCCTGGTTGGTGCTGGAGGCCATGGGACAAGAGTGGGTCCCAGTCACCAAATCCTGGAGGTTAAACGAACGGCATTACGGTGCCCTGATCGGCCTTAATCGGGCTGAGATGGCGTTGAACCATGGCGAGGAGCAGGTTAAACTGTGGAGGCGTAGCTATGATATCACGCCGCCCCCCATTGATGAGTCACATCCCTATTATGCTGAAATTTACAATGACCGCCGATATAGTACGTGTGACGTCCCGAAAGAGGAACTGCCCAAAACAGAAAGTCTGAAGGAAGTGTTGGACAGACTTCTTCCTTACTGGAATGATGTCATTGTACCGGTGATCAAAAGTGGCCAAACAGTCCTCATCTCTGCACATGGCAACAGCTGCAGGGCTTTGCTTAAACATTTGGAAGATATATCGGAAACAGACATTGTGAATGTAACGCTGCCCACAGGAGTTCCCGTCTTACTGGAGATGAATGAAAACCTTCGACCGGTCAAACCACGTCAGCTCCTGGGCGACCAGGCCAAAATTCAGGCAGCCATCAAAAAGGTGGAGGATCAAGGGAAGTGGATTTTAGGCCACAGAAAACCAGTGGTGCCTACCTTTGGGTAAAAATAGCATCCATCAGTTTTCTATTAGAATTTCTTA

Function

symbol description
bpgm Predicted to enable bisphosphoglycerate mutase activity; hydrolase activity; and phosphoglycerate mutase activity. Predicted to act upstream of or within glycolytic process. Human ortholog(s) of this gene implicated in familial erythrocytosis 8. Orthologous to human BPGM (bisphosphoglycerate mutase).

GO:

id name namespace
GO:0043456 regulation of pentose-phosphate shunt biological_process

KEGG:

id description
K01837 BPGM; bisphosphoglycerate/phosphoglycerate mutase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000055_06443549_06446405.mRNA True 879 mRNA 0.50 3 6443549 6446441

Neighbor

gene id symbol gene type direction distance location
CI01000055_06439930_06442140 NA coding upstream 1396 6439864 ~ 6442153 (+)
CI01000055_06432420_06434344 NA coding upstream 9063 6432420 ~ 6434486 (+)
CI01000055_06424643_06428152 TNNI1AL coding upstream 15228 6424465 ~ 6428321 (+)
CI01000055_06420746_06423701 NA coding upstream 19400 6420164 ~ 6424149 (+)
CI01000055_06377893_06381162 TMEM178B coding upstream 62334 6377754 ~ 6381215 (+)
CI01000055_06472841_06481094 NA coding downstream 26400 6472841 ~ 6481156 (+)
CI01000055_06487661_06489302 NA coding downstream 41220 6487661 ~ 6490167 (+)
CI01000055_06513312_06529035 NA coding downstream 65925 6512366 ~ 6529510 (+)
CI01000055_06530845_06542679 NA coding downstream 83550 6529991 ~ 6542725 (+)
CI01000055_06716393_06716976 KXD1 coding downstream 269952 6716393 ~ 6716976 (+)
G240481 NA non-coding upstream 29060 6414192 ~ 6414489 (+)
G240479 NA non-coding upstream 30160 6412854 ~ 6413389 (+)
G240473 NA non-coding upstream 41635 6401301 ~ 6401914 (+)
G240472 NA non-coding upstream 42742 6399993 ~ 6400807 (+)
G240358 NA non-coding upstream 110001 6331331 ~ 6333548 (+)
G240355 NA non-coding downstream 50228 6496669 ~ 6498737 (+)
G240315 NA non-coding downstream 55611 6502052 ~ 6508423 (+)
G240550 NA non-coding downstream 194187 6640628 ~ 6641114 (+)
CI01000055_06310117_06334586 GRAMD4B, GRAMD4 other upstream 102384 6310117 ~ 6334801 (+)
G240344 NA other upstream 249649 6163860 ~ 6164011 (+)
CI01000055_06087070_06088629 ETFRF1, LYRM5, LYRM5B other upstream 354790 6087034 ~ 6088759 (+)
CI01000055_05614889_05616453 NA other upstream 825958 5614065 ~ 5617591 (+)
G240099 NA other upstream 899737 5525472 ~ 5544153 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024062 bpgm coding NC_007136.7 CM002909.2 20116407 ~ 20127087 (+)