XLOC_010025 (pear1)


Basic Information

Item Value
gene id XLOC_010025
gene name pear1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30438041 ~ 30520157 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019944
GCATTGGATAGAGATACAGCGATTGGTTACGCGCATAGCGGTCACAGCGATCACTTTGGAAGCAAGTCAAGTCTTCGAAAATTATTTACCGGTTTATAGTGTAAAGAAGGAGACACATCTGCTGTAAGAGTATCTTCGTTGTTCTCCAAAGGCAGCACAGCAGACCTTTGCTTAGTTGAGTCCAATGCCACTTCATCAGTAAGGATGAAGACGGCGGAGATCTGTGTGGTCCTGTTTGTCTTGGGCTGTGTGTGTGAACTGTCATTGTCTTTGGACCCCCGAGATCCAAATGTGTGCAGTTTATGGGAAAGTTTCACCACTTCAGTGAAGGAATCATACGCTCAGCCTTTCGACCAAATGTCTGAAGAGCCCTGCTCTGAACCCTGGAGCGCTAACAAATGCACCCGGCACAGGATCACTTATAAAACGCTTTATAGGCAGGTGGTGAAAATGGACTATCGTAGGAGGTATCAGTGCTGTCCTGGCTTTTACGAGAGCAGGAATAAATGCGTCCcacGTTGCACTAAGGAGTGTGTCCATGGCCGCTGTGTAGCACCTGATCGCTGCCAGTGTGAGATGGGCTGGCGTGGAGACGACTGTTCCAGCTcaTGTGATGGTCAGCATTGGGGTCCAGGCTGCCGGCGTCTCTGCGAGTGCCAGAATGGAGGAGAGTGTGACGTTCTCACAGGAAACTGTCAGTGTCCAGCAGGATACACTGGTCAACACTGCCACGACCCCTGTCCAGTGAAGTGGTTTGGTCAGGGCTGTCGGCAAGAGTGTCAGTGTGGAACTGGAGGAATCTGCAATCAGACCACTGGAGAGTGTGTGTGCAAACAGGGCTTTACTGGAACTCTCTGTGAGGAGTCATGTCCGAGGCCAAAACGCTGTGCTGCACGCTGCCCGTGTCAGAACGGAGGAATCTGCCAGGGCAATGGGGTGTGTTTGTGTCCACCCGGCTGGATGGGTCCAGTTTGTACTGAACGGTGTCCACCAGGCCGTTTTGGTATAAACTGCTCTAAAGATTGTTTGTGCCATAACGGAGGTCACTGTGATCAAGAAAAGGGCCAGTGTCAGTGTGATGCAGGCTACACCGGAGAAAGGTGTAACGAGGAGTGTCCAGTGGGCACATATGGTGAGGACTGTAAGGGAGTATGTGACTGTGCGAACGGAGCCCGTTGTTATAACATCCACGGCGGCTGTCTGTGTGAGCCGGGGTTCAAAGGTCCTCGCTGTGACCACCGCATGTGTCCTGAAGCGGTctttggcatgcactgtcaacACCGCTGCCTCTGCAACCCACTAAACACCCTCAGCTGTCACCCTCTGAAGGGCGAGTGCACCTGTCAGCCAGGCTGGGCTGGTCTGTACTGTAATGAAACCTGTGCTCAGGGTTATTATGGTAATGGCTGCCTGGAGCCCTGCCTGTGTGTGAATGGAGGAGTGTGTGACTCAGTGACTGGCCAGTGCCACTGTCCACCCGGATTTACGgggctGCACTGTGAGAAGCTCTGTGAGGATGGTTTCTACGGAAAGGGCTGCTTGTCTGCTTGTAAATGTGTTAACTCTATAGTCTGTTCTCCTGTGGATGGAGCGTGTATCTGTAAGGAAGgATGGAGAGGACCTGACTGTTCAATCGCATGTTCAGAGGGCACATGGGGTCCTGGCTGTAACCGAACTTGCAAGTGTACAAATGGAGCGTCTTGCGACCCTGCTGATGGGTCGTGCAAGTGCACCGCAGGGTGGAGAGGAGCATCCTGTGACGAGCCCTGTCTAATCGGGACTTTTGGACCAGGCTGTCAAAACCAATGTGACTGTGTGCATGATGAGGGATGTGAGAGTGTTACAGGACAGTGTCTGTGTTTACCAGGCTGGACAGGTGTGCGCTGTACACAGCAGTGTCCAGAAGGAACATGGGGAATTCAGTGCAACCAGACCTGCTCCTGCCTCAACAGCGCCACCTGTCAGGCACATACAGGAACCTGCTTGTGCAAACCGGGATTTTGGGGAGCTCAGTGTCAACACATGTGTAGTGCTGGTCTGTTTGGAGAAAAGTGCAGTCGTCATTGCCCACCATGTGTCCACGCCTCCTCCTGCCATCACATTACAGGAGATTGTCAGTGTTTGTCTGGATATACTGGACCATTGTGTGAACAAGCTTGTCCCGTTGGTCGATACGGAAGCCATTGTAGCAATGTGTGCAGGTGCACCAATAATGCAACATGTCATCACGAGGTTGGTTTGTGCATCTGTCCTGCTGGATGGACTGGATCAGACTGCTCTTTATTGTGTCAAGCTGGGACGTTCGGCATTAACTGTGCCCAGACTTGCTCGTGTCCCCCAAACCATTCCTGTGACCCACACAATGGAGACTGTGTGTGTGAACCTGGACCAGGAGAGGCCTGTAAACCAGAGCAGGAGTTGAGTGTGATGGTGCCCGTGTCTCCGGTGGAGAGGGACTCGTGGGGTGCGATCGCAGGCATTGTGGTGCTGGTGATTCTGGTTGTGCTGCTGCTGGCCGTTCTGCTGTTGTATCGGCGCAGACAGCAGGACAAACAGAGCAACACACCCGTCGTCTCTTTCTCTTCTACACGCACCGTCAGTTCCGAGTATGCCGTGCCTGATGTTCCGCATAGCTACCATCACTATTACTCAAACCCGAGTTACCACACACTGTCTCAGAACAGACCTCCACTGCCACACCTGCCCAACAACCAGGATCGAGCCATCAAGAACACCAATAACCAGCTGTTCTGCAGTCTGAAGAACATGGAGCGGGAGAGGAGAGGTCTGTTTACAGCTGATACTAATGCAACACTTCCTCCAGGCTGGAAACACCAGGAGCCGCCGAAAGATCCAGGGGCTTTTGGGATCGATCGGAGTTACAGCTACAGCGCGACTCTTGGGAAGCACTACAACAAAGAGTTGAAGGATTCCTGTGTggcagtgagcagcagttctctGAACAGTGAAAACCCCTACGCCACCATTAAAGATCTGCCCGGCCTGCCGGTGTGTCCTCCTGAGAGCAGCTACATGGAGATGAAGTCAGCAGTGCCACGTCAAAGATCCTACACTCAAATAATCAGCCCACCCCTCATGACTGCCCCCGCTCTGCCCTGCACAGGACACTGTTCCCTTAGCAATGCTGAAGAACAGGAACTTCAGAATCACTATGATCTGCCCATCAACAGCCACATTCCTGGGCATTATGACTTGCCCCCGGTGCGCAGACCACCTTCACCATCGCCACGCAGACTGCCAAACTGATCCTTTTCTCTCCAAACCCAAAGACTCTTCTCTAAAATCACTGCCAAAGACTGAGAGAAAATAAATGGAGAAGGAAATGCTATCCACAGAAGATTGGATAGAAAACTGCGCAACACTGCCCTCTACTGGACTACAACCGTTGATTGTTCATGAAGAAAAAGTTTCTCCTGCACAGAAATTTAACCCATTTAAGCCTGTGGAAAGCAATTATTGCCAAAAGCTTTATGACTTTTTTCCATCAAACAATATTTTCCAGTGCATTAAGTTCTGGTATTAAAATAGACTTGCTGGATTTAATGTGGTGACCTATGAGCGTTTCCGTACAAAGTTATGTGTCCATCTTTAAAGTGAATGTTTTTTAAATCTTATGTGAGATCCACATGTACGCTCATATAAAAAGATGGGCAAGTTTTTAATAACTATCTGGGCATTAATGGGTTAAATtccacatatttttttatatttttaatgctaATCATGTAATCCGGTAATCAGGGTGTAAATAACAGTTTCATTTTAAACAGCCACTGTAAATGAGTTCGTAAGATACAACATTTTGCTATGAATGTCAAGCTTAAGAGCTGTAAATAGTGTACATAAAAGTTTTTTTCATGCACAACTTGTCGTAAATTCATTTGTTTACAAAGTGAAAGAAACTAATCGTTTTTTTAAACACCTTGTCGCGAGCTCTGTTTACTAAGCGAAataatttatctttttatttactcacctttatgTCGTCTCGTGTACTTTTTTGGAAAGAGAAACGCTGTGGTATTTTGTTTGACAAAGTCAAGTGATTTCGGTAAAAGCAACCTTTTCACATAAAAGCTTCGAAAGACGCATTTGGGTTGACTGAGATCGCCCTCCAGCGGCAAAACCTTTGAACTACctcc
>TCONS_00019945
AACGAATGCAATGCTAAATAGGACAAATTGTTTAGAGAATGGATAATTGGGAActttaaaaatatcaattattttaatagcataaaactgaatcaaatgtaaaattaagaatAAGTCACAATatcaaagagttttttttttttttttttacgtaagaCTCATTTAGGGTTTAGGACCAACAAAGAAAACTCTTCCCAAGCAATCCTAACCACAGGCCGTAATTAACTAATAAATCCTTAACTGTCATTCCAAAAACTCATTATAAATTCCTGAGGGAACCCATGGCTTCAAAAATGCCAGTTCTCTTCTTGAATCTAGCCTTAAAAACTAAACTGCTTTATGATTCCCTCGAGCAACAAAGTATATGGGGACAGATTCAGCAATTACTGTGTAGTACCATACATCATGTTGAATGATATGAATGATACAAATAACAAGTGACTGATATAAAGATAGCATGACTAAATCCTTGTTCCCTTCCAGTTTCACCACTTCAGTGAAGGAATCATACGCTCAGCCTTTCGACCAAATGTCTGAAGAGCCCTGCTCTGAACCCTGGAGCGCTAACAAATGCACCCGGCACAGGATCACTTATAAAACGCTTTATAGGCAGGTGGTGAAAATGGACTATCGTAGGAGGTATCAGTGCTGTCCTGGCTTTTACGAGAGCAGGAATAAATGCGTCCGTGAGTAATAAATTGATGCTTAACTTCAACCTTAATGGTGTGTTTTTGAATTTTTCATCTTTCAACTGGTTATTTTTCCTTTAATGccctctctgtctgtgtgtgtgtagcacGTTGCACTAAGGAGTGTGTCCATGGCCGCTGTGTAGCACCTGATCGCTGCCAGTGTGAGATGGGCTGGCGTGGAGACGACTGTTCCAGCTcaTGTGATGGTCAGCATTGGGGTCCAGGCTGCCGGCGTCTCTGCGAGTGCCAGAATGGAGGAGAGTGTGACGTTCTCACAGGAAACTGTCAGTGTCCAGCAGGATACACTGGTCAACACTGCCACGACCCCTGTCCAGTGAAGTGGTTTGGTCAGGGCTGTCGGCAAGAGTGTCAGTGTGGAACTGGAGGAATCTGCAATCAGACCACTGGAGAGTGTGTGTGCAAACAGGGCTTTACTGGAACTCTCTGTGAGGAGTCATGTCCGAGGCCAAAACGCTGTGCTGCACGCTGCCCGTGTCAGAACGGAGGAATCTGCCAGGGCAATGGGGTGTGTTTGTGTCCACCCGGCTGGATGGGTCCAGTTTGTACTGAACGGTGTCCACCAGGCCGTTTTGGTATAAACTGCTCTAAAGATTGTTTGTGCCATAACGGAGGTCACTGTGATCAAGAAAAGGGCCAGTGTCAGTGTGATGCAGGCTACACCGGAGAAAGGTGTAACGAGGAGTGTCCAGTGGGCACATATGGTGAGGACTGTAAGGGAGTATGTGACTGTGCGAACGGAGCCCGTTGTTATAACATCCACGGCGGCTGTCTGTGTGAGCCGGGGTTCAAAGGTCCTCGCTGTGACCACCGCATGTGTCCTGAAGCGGTctttggcatgcactgtcaacACCGCTGCCTCTGCAACCCACTAAACACCCTCAGCTGTCACCCTCTGAAGGGCGAGTGCACCTGTCAGCCAGGCTGGGCTGGTCTGTACTGTAATGAAACCTGTGCTCAGGGTTATTATGGTAATGGCTGCCTGGAGCCCTGCCTGTGTGTGAATGGAGGAGTGTGTGACTCAGTGACTGGCCAGTGCCACTGTCCACCCGGATTTACGgggctGCACTGTGAGAAGCTCTGTGAGGATGGTTTCTACGGAAAGGGCTGCTTGTCTGCTTGTAAATGTGTTAACTCTATAGTCTGTTCTCCTGTGGATGGAGCGTGTATCTGTAAGGAAGgATGGAGAGGACCTGACTGTTCAATCGCATGTTCAGAGGGCACATGGGGTCCTGGCTGTAACCGAACTTGCAAGTGTACAAATGGAGCGTCTTGCGACCCTGCTGATGGGTCGTGCAAGTGCACCGCAGGGTGGAGAGGAGCATCCTGTGACGAGCCCTGTCTAATCGGGACTTTTGGACCAGGCTGTCAAAACCAATGTGACTGTGTGCATGATGAGGGATGTGAGAGTGTTACAGGACAGTGTCTGTGTTTACCAGGCTGGACAGGTGTGCGCTGTACACAGCAGTGTCCAGAAGGAACATGGGGAATTCAGTGCAACCAGACCTGCTCCTGCCTCAACAGCGCCACCTGTCAGGCACATACAGGAACCTGCTTGTGCAAACCGGGATTTTGGGGAGCTCAGTGTCAACACATGTGTAGTGCTGGTCTGTTTGGAGAAAAGTGCAGTCGTCATTGCCCACCATGTGTCCACGCCTCCTCCTGCCATCACATTACAGGAGATTGTCAGTGTTTGTCTGGATATACTGGACCATTGTGTGAACAAGCTTGTCCCGTTGGTCGATACGGAAGCCATTGTAGCAATGTGTGCAGGTGCACCAATAATGCAACATGTCATCACGAGGTTGGTTTGTGCATCTGTCCTGCTGGATGGACTGGATCAGACTGCTCTTTATTGTGTCAAGCTGGGACGTTCGGCATTAACTGTGCCCAGACTTGCTCGTGTCCCCCAAACCATTCCTGTGACCCACACAATGGAGACTGTGTGTGTGAACCTGGACCAGGAGAGGCCTGTAAACCAGAGCAGGAGTTGAGTGTGATGGTGCCCGTGTCTCCGGTGGAGAGGGACTCGTGGGGTGCGATCGCAGGCATTGTGGTGCTGGTGATTCTGGTTGTGCTGCTGCTGGCCGTTCTGCTGTTGTATCGGCGCAGACAGCAGGACAAACAGAGCAACACACCCGTCGTCTCTTTCTCTTCTACACGCACCGTCAGTTCCGAGTATGCCGTGCCTGATGTTCCGCATAGCTACCATCACTATTACTCAAACCCGAGTTACCACACACTGTCTCAGAACAGACCTCCACTGCCACACCTGCCCAACAACCAGGATCGAGCCATCAAGAACACCAATAACCAGCTGTTCTGCAGTCTGAAGAACATGGAGCGGGAGAGGAGAGGTCTGTTTACAGCTGATACTAATGCAACACTTCCTCCAGGCTGGAAACACCAGGAGCCGCCGAAAGATCCAGGGGCTTTTGGGATCGATCGGAGTTACAGCTACAGCGCGACTCTTGGGAAGCACTACAACAAAGAGTTGAAGGATTCCTGTGTggcagtgagcagcagttctctGAACAGTGAAAACCCCTACGCCACCATTAAAGATCTGCCCGGCCTGCCGGTGTGTCCTCCTGAGAGCAGCTACATGGAGATGAAGTCAGCAGTGCCACGTCAAAGATCCTACACTCAAATAATCAGCCCACCCCTCATGACTGCCCCCGCTCTGCCCTGCACAGGACACTGTTCCCTTAGCAATGCTGAAGAACAGGAACTTCAGAATCACTATGATCTGCCCATCAACAGCCACATTCCTGGGCATTATGACTTGCCCCCGGTGCGCAGACCACCTTCACCATCGCCACGCAGACTGCCAAACTGATCCTTTTCTCTCCAAACCCAAAGACTCTTCTCTAAAATCACTGCCAAAGACTGAGAGAAAATAAATGGAGAAGGAAATGCTATCCACAGAAGATTGGATAGAAAACTGCGCAACACTGCCCTCTACTGGACTACAACCGTTGATTGTTCATGAAGAAAAAGTTTCTCCTGCACAGAAATTTAACCCATTTAAGCCTGTGGAAAGCAATTATTGCCAAAAGCTTTATGACTTTTTTCCATCAAACAATATTTTCCAGTGCATTAAGTTCTGGTATTAAAATAGACTTGCTGGATTTAATGTGGTGACCTATGAGCGTTTCCGTACAAAGTTATGTGTCCATCTTTAAAGTGAATGTTTTTTAAATCTTATGTGAGATCCACATGTACGCTCATATAAAAAGATGGGCAAGTTTTTAATAACTATCTGGGCATTAATGGGTTAAATtccacatatttttttatatttttaatgctaATCATGTAATCCGGTAATCAGGGTGTAAATAACAGTTTCATTTTAAACAGCCACTGTAAATGAGTTCGTAAGATACAACATTTTGCTATGAATGTCAAGCTTAAGAGCTGTAAATAGTGTACATAAAAGTTTTTTTCATGCACAACTTGTCGTAAATTCATTTGTTTACAAAGTGAAAGAAACTAATCGTTTTTTTAAACACCTTGTCGCGAGCTCTGTTTACTAAGCGAAataatttatctttttatttactcacctttatgTCGTCTCGTGTACTTTTTTGGAAAGAGAAACGCTGTGGTATTTTGTTTGACAAAGTCAAGTGATTTCGGTAAAAGCAACCTTTTCACATAAAAGCTTCGAAAGACGCATTTGGGTTGACTGAGATCGCCCTCCAGCGGCAAAACCTTTGAACTACctcctgtttatagttttatacatttatttgtagaAGTTTTATTGAtctttatatacatacatagaaGCTCtgttatatatatctatatatatgtctatatatatatatgtctatatatatatatatatatatatatatagtacagggCTTGACAATAACTTTTATGACCACCGGCCATTGTGCCTAGTAGTTTTCCAAAATCCCTAGCCATcaactttttcacacacacaaatatatatatatatatatatatattttttttttttctttttttttttccttatataTATGCagaaatttgactttggcatacTAAAATACTTTGCTAAAAGTTTTGTCCACGTGACTCATTCCTTTCACTTTTTGTGTAATGCATGGCCTTcgtcaatgagcatgagcaaatggattTTGGTTTTTATAGTGTATTGCAATTCGTTTTTATTACTTGACTTTTCTGGGATCAACAAGGATTAACCAATTTTTCTTCTCTAgccacaacaaaaaataaaaaatatatttcttagacacgaaatttaaataatgtgttaaaaccAATGgccaaaacaaatcaaatatagGCTGtctgtatacatgcactttttattcaacaatatttttctttgaaaatttgccaataattgtttttgtaaatgtCATTTATCTAAAATGTTCAGCTCACCATCTGCATGattattctttttttgtattttgtattcacTGGTTTCTTCTGCTCACATAACACACATAATTTTTGCCATCTCTTATGTCGGCCCCACACCATTGGGACAACTTTTTTGTGTAACTCTcctttttaagaaaactacaatttaaaaataatttttaaccagccaaagtggctagttgGAGCGGCTCcctaacctatatatatatatatgtatatacatat

Function

symbol description
pear1 Predicted to be involved in apoptotic cell clearance. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PEAR1 (platelet endothelial aggregation receptor 1).

GO:

id name namespace
GO:0043277 apoptotic cell clearance biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-091230-1 Predicted to be involved in apoptotic cell clearance. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PEAR1 (platelet endothelial aggregation receptor 1).

Ensembl:

ensembl_id ENSDARG00000060753

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019944 False 4163 mRNA 0.49 24 30438041 30519254
TCONS_00019945 True 5348 mRNA 0.44 21 30483043 30520157

Neighbor

gene id symbol gene type direction distance location
XLOC_010024 NA coding upstream 107160 30329863 ~ 30330881 (+)
XLOC_010023 tmem79b coding upstream 111986 30316177 ~ 30326055 (+)
XLOC_010022 LO017848.1 coding upstream 131683 30301539 ~ 30306358 (+)
XLOC_010020 sema6e coding upstream 166597 30002605 ~ 30271444 (+)
XLOC_010021 FP103008.1 coding upstream 357380 30080543 ~ 30080661 (+)
XLOC_010026 mc2r coding downstream 55744 30575901 ~ 30577136 (+)
XLOC_010027 fam210ab coding downstream 84230 30604387 ~ 30612730 (+)
XLOC_010028 gstk2 coding downstream 412887 30933044 ~ 31006689 (+)
XLOC_010029 BX510336.1 coding downstream 450344 30970501 ~ 30971157 (+)
XLOC_010030 NA coding downstream 570841 31090998 ~ 31094580 (+)
XLOC_010019 AL928927.1 non-coding upstream 529071 29903644 ~ 29908970 (+)
XLOC_010018 NA non-coding upstream 624789 29721627 ~ 29813252 (+)
XLOC_010014 NA non-coding upstream 837373 29591119 ~ 29600668 (+)
XLOC_010031 NA non-coding downstream 601599 31121756 ~ 31135431 (+)
XLOC_010035 CR855311.5 non-coding downstream 1114313 31634470 ~ 31634595 (+)
XLOC_010041 NA non-coding downstream 1440751 31960908 ~ 31985059 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_08457984_08480177 PEAR1 coding CI01000027 null 8457113 ~ 8480827 (+)