XLOC_010027 (fam210ab)


Basic Information

Item Value
gene id XLOC_010027
gene name fam210ab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30604387 ~ 30612730 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019947
AAGGACTACACTTCCCATCATGCCGCGCGCAACAGCTCCATGTGGACGACTGTGGAGAACGTGCGTGTACATGACATGTGTCTGGAGGTATGGAGCTCTGCGAGGACTCTCCATAAACACAGAACAGACCTTCCAGACGTGAATGTggcgctgtgtgtgtgtcaggtgtgaTGCAGCGGCTGTGGGCTCCAGTGACGCTTCGGCGTGTGCTCCTGCTGCGTTCGGTGTACCTGCCTCACACCTGGGCAATGCAGGAGCCTCCTTTAGCCGTCCTGAGCCCTCGCTACTTCAGCTGCACTAATGCCATCAGGGCAAAAGAAGCCCACAAAACGTCCACAGAGGAACAAGAGGAAGTGCCATTAAACCCTCCACAGAGTCTAGCAGGAACCGAGGGCCTCTATAAGGCTGATTCAGAGCCTGTCCCACACAATAAGGGAGATATCGACCCTCTGCAGGACAAATCGATTGGGATCTTCCAGAGatttaaaaagacttttaaacAGTATGGTAAAGTCATGGTGCCCGTGCACATCGTCACATCCACAGTGTGGTTTGGGAGTTTCTATTATGCTGCAATGAAGGGCGTGAATCTGGTGCCCTTTCTGGAGTTCATTGGTTTACCGGATTGGATAGTGGGGATTTTGCGAGATTCCCAGGGTGGCTATGCACTTACAGCTTATGCCATGTATAAGCTCGCTACTCCTGCCCGCTACACTGTCACTATGGGCGGCACGTCTCTGTCCGTACAATACCTCCGCAAACATGGATACTTGTCCACTCCTCCACCTGTTAAAGAATTTCTGCAGGACAAAATGGAGGAGACCAGAGAACTACTGACCGAAAAGATGGAGGAGACCAAAGAGAGGTTTTCAGAGAAGATGGAGGAAACCAAAGAACTTCTCTCAGAACGGATGGAGGAGACAAAAGAGCGCTTCTCAGAAACAAAAGACAAGTTCTCTGAGAAACTGCAGGAGACGAAAGACAAAATGTCTTTCCGTAAGAAAGCAGACTAGCCCGCTTCGGAAAGAATTATTTGTTATAAACTCATAAGCGTAATATTGAATATGTCTGGTGTTGACTTAGAGCAGGGATTTCTAAACTTGctcctggagggtcagtgtcctggagagtttagctccaaccctaatcaaacacatgaaccagctaatcaagctcttacaagaAATACTAGAAACTTcatggcaggtgtgttgaagcaagttggagctcaaatcagcaggacaccggccctccatgactGTGTTTGGTCACCCCTGACTTAGAGGGactgtttacccaaaaatgaaaaactgccatttatttattcttcCTCAGGCCATCAGAGATAAGATGTAGGTGTGCCTTTTCTTGATTAAAATATTGATGAggacattttagtttaaaaaacaaactgGTCCAGTTATTCATGAATTGGAAGTCTGTGGCTATCAGCACTTAACGTTATTTCAATTCTCTGTTTGTCTGCACATGCCAGAATTGACAATAACGTTGACTGACTTTATAGGTGATATTATAAACCATGACTCCTGACGA

Function

symbol description
fam210ab Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human FAM210A (family with sequence similarity 210 member A).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050306-43 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human FAM210A (family with sequence similarity 210 member A).

Ensembl:

ensembl_id ENSDARG00000040186

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019947 True 1554 mRNA 0.47 4 30604387 30612730

Neighbor

gene id symbol gene type direction distance location
XLOC_010026 mc2r coding upstream 27251 30575901 ~ 30577136 (+)
XLOC_010025 pear1 coding upstream 84230 30438041 ~ 30520157 (+)
XLOC_010024 NA coding upstream 273506 30329863 ~ 30330881 (+)
XLOC_010023 tmem79b coding upstream 278332 30316177 ~ 30326055 (+)
XLOC_010022 LO017848.1 coding upstream 298029 30301539 ~ 30306358 (+)
XLOC_010028 gstk2 coding downstream 320314 30933044 ~ 31006689 (+)
XLOC_010029 BX510336.1 coding downstream 357771 30970501 ~ 30971157 (+)
XLOC_010030 NA coding downstream 478268 31090998 ~ 31094580 (+)
XLOC_010031 NA coding downstream 509026 31121756 ~ 31135431 (+)
XLOC_010032 scxb coding downstream 783917 31396647 ~ 31402154 (+)
XLOC_010021 FP103008.1 non-coding upstream 523726 30080543 ~ 30080661 (+)
XLOC_010019 AL928927.1 non-coding upstream 695417 29903644 ~ 29908970 (+)
XLOC_010018 NA non-coding upstream 791135 29721627 ~ 29813252 (+)
XLOC_010014 NA non-coding upstream 1003719 29591119 ~ 29600668 (+)
XLOC_010035 CR855311.5 non-coding downstream 1021740 31634470 ~ 31634595 (+)
XLOC_010041 NA non-coding downstream 1348178 31960908 ~ 31985059 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_08530476_08532249 FAM210AB coding CI01000027 null 8528484 ~ 8532996 (+)