XLOC_010028 (gstk2)


Basic Information

Item Value
gene id XLOC_010028
gene name gstk2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 30933044 ~ 31006689 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019948
tatgtttttaacattgatttGattttatgttataATAATGTGGTTGCATTAAAAACCCTgccaaatAAGTCACCACAAGGTGGCGCCTTTTATATGTTAATCTACCGAATTATAAGattaaaaataaacacatacaaacaagtcCACAAttggtGTCAGagtAGGGAACAAGCCAAAAGAAAAATGCTCTCATCCAGTCTAAGATGTCCAGTTCCAGGTTCACTTTCAGCCTCAATGACAGGCTATATAGGttttcCCATGAACCTATCATTcggagatatttatttatttattttaaatttgaccttaTATACtatgaactttcccaattttaaaaacatcaaaacCGGATTTTTGTTGCCATCTATTGGTGAGGTGATTATTTTGACACAATTTCTTATCTCTTTAACTGCAATTTGGTTATGCCCAATCATTTCTGCAAAGATGAAAGtaatacaacaacagcaatataaacaaattactcaaagattgattcatccaaaagttccagagcatgtcttaggTTTGGTCTTTTTCTACCTAAACTTTTTTTATAAGGACATGAATGaaacAGCTGAACTACTT
>TCONS_00019949
ACTATAAAACAGCCTGACAAACAATCAACATCACACCAACAAGAGGAGAACGACAGCAAGATGTCCAGTTCCAGAAAAGTGGTTGAATTGTTCTATGATGTCGTTTCTCCTTATTCCTGGCTGGCATTTGAGGTGCTGTGTCGCTACAAAAATGTTTGGAACATTGACCTCAAATTTAAACCATCATTTTTAGGAGGAGTTTTTCACGGTTCAGgtAACACTGAACCTGGAATGGTCGATAATAAGCTCCATTATATGATCACAGATCTGAAACTGATGTCTGAGTACTATGGGGTCCCTGTAAATCCACCTTCGCCTTGTAAGAAAGATACTTTGCCTGCAATGCGCTTTGTGACTGCTATAGCAGAGAAAAACCAAGAGGAAAATGTGCTGGTGGAGAAGGTTTCTAGAGAGCTTTGGAAACGAATGTGGCAAAAGCATCAGGACATTACCCAGCCTCTCTCGCTTACTGAGGCAGGATTACTGGTAGGTCTCTCATCCAATGAGGTGGAAGAATTGCTGACCAATGCCAAATCTCAACCAATTAAAGACAAGCTGAAGAGTGTCACACAGGAGGCACTAGAGAAAAATGCCTTTGGTCTTCCATTCATTGTGTGCCATGTTAACGGGAAGGTTGAGGTTTTCTTTGGTTGTGACAGATTTGAGCTCATAGCTCATTGCATCGGGGAGAAGTGGGCAGGACCTTGTCCAATCAAGACCACAATGTGACACTTCTGTTCCATAatgtatatatttctttataCTATAAAGagcctatagaaaatcatcataccctGTGAATCTTTTAGGATGAAGTTGTAGAAGGCACATGTTAGACGAAGAATAGAAAACATTTCAATTTCTGGAAAAGTtgatttgatttcaggctgtATGACAAATACAGTCACTATTTCAAAGTGGCATGATGATTTTCATGATGAGTTT
>TCONS_00019950
CTGTGTCGCTACAAAAATGTTTGGAACATTGACCTCAAATTTAAACCATCATTTTTAGGAGGAGTTTTTCACGGTTCAGgtAACACTGAACCTGGAATGGTCGATAATAAGCTCCATTATATGATCACAGATCTGAAACTGATGTCTGAGTACTATGGGGTCCCTGTAAATCCACCTTCGCCTTGTAAGAAAGATACTTTGCCTGCAATGCGCTTTGTGACTGCTATAGCAGAGAAAAACCAAGAGGAAAATGTGCTGGTGGAGAAGGTTTCTAGAGAGCTTTGGAAACGAATGTGGCAAAAGCATCAGGACATTACCCAGCCTCTCTCGCTTACTGAGGCAGGATTACTGGTAGGTCTCTCATCCAATGAGGTGGAAGAATTGCTGACCAATGCCAAATCTCAACCAATTAAAGACAAGCTGAAGAGTGTCACACAGGAGGCACTAGAGAAAAATGCCTTTGGTCTTCCATTCATTGTGTGCCATGTTAACGGGAAGGTTGAGGTTTTCTTTGGTTGTGACAGATTTGAGCTCATAGCTCATTGCATCGGGGAGAAGTGGGCAGGACCTTGTCCAATCAAGACCACAATGTGA

Function

symbol description
gstk2 Predicted to enable glutathione peroxidase activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion and peroxisome.

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0019432 triglyceride biosynthetic process biological_process
GO:0005777 peroxisome cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0016740 transferase activity molecular_function
GO:0004602 glutathione peroxidase activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function
GO:0004364 glutathione transferase activity molecular_function
GO:0008374 O-acyltransferase activity molecular_function
GO:0004144 diacylglycerol O-acyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-14 Predicted to enable glutathione peroxidase activity and glutathione transferase activity. Predicted to be involved in glutathione metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion and peroxisome.

Ensembl:

ensembl_id ENSDARG00000019585

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019948 False 585 mRNA 0.32 35 30933044 31006689
TCONS_00019949 False 945 mRNA 0.41 8 30959423 30966580
TCONS_00019950 True 594 mRNA 0.44 6 30961822 30966364

Neighbor

gene id symbol gene type direction distance location
XLOC_010027 fam210ab coding upstream 320314 30604387 ~ 30612730 (+)
XLOC_010026 mc2r coding upstream 355908 30575901 ~ 30577136 (+)
XLOC_010025 pear1 coding upstream 412887 30438041 ~ 30520157 (+)
XLOC_010024 NA coding upstream 602163 30329863 ~ 30330881 (+)
XLOC_010023 tmem79b coding upstream 606989 30316177 ~ 30326055 (+)
XLOC_010030 NA coding downstream 84309 31090998 ~ 31094580 (+)
XLOC_010031 NA coding downstream 115067 31121756 ~ 31135431 (+)
XLOC_010032 scxb coding downstream 389958 31396647 ~ 31402154 (+)
XLOC_010033 ndrg1b coding downstream 505050 31511739 ~ 31517227 (+)
XLOC_010034 SLA coding downstream 535956 31542645 ~ 31547800 (+)
XLOC_010021 FP103008.1 non-coding upstream 852383 30080543 ~ 30080661 (+)
XLOC_010019 AL928927.1 non-coding upstream 1024074 29903644 ~ 29908970 (+)
XLOC_010018 NA non-coding upstream 1119792 29721627 ~ 29813252 (+)
XLOC_010014 NA non-coding upstream 1332376 29591119 ~ 29600668 (+)
XLOC_010035 CR855311.5 non-coding downstream 627781 31634470 ~ 31634595 (+)
XLOC_010041 NA non-coding downstream 954219 31960908 ~ 31985059 (+)
XLOC_010047 NA non-coding downstream 1086023 32092712 ~ 32095684 (+)

Expression


Co-expression Network