XLOC_010044 (leng1)


Basic Information

Item Value
gene id XLOC_010044
gene name leng1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 32051572 ~ 32058276 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019975
GTAGTTCACTCACGTCAACTTACTTCCGGTGTTTTCAAGCTCTCTTTCCGTACAATCGTGTTGATATATCTTTTTAGAAACCTGTTTATTATGTTACGTTTTGTTTGTGAATTTGCTGTATGGATGTAGCGGACCTAACGTACACACGAATCAATTGACGACTTTAAATTTCGTTGCGTAATTGGTCGACGGGGCCGTTTCGAGTCATAAACTAagctgtttgcttgtttgttagaCATTACATGTTGTCGGACAAAACTGCTCCGGGCCTAGAATTATATTAGTTCTGACTCACTGCTCTCttacatattaaataatgaacattttGCCCAAAAAGAGCTGGCATGTGCGCAATAAGGACAACATTGCGCGCGTGCGCCGCGACGAGGCTCGTGCAGCGGAGGAAGAGCGCGAGATTCAGCAGCGAGTGGATCGCGCAGAGCAAGAGGCTCGAACCGAATTTTTAAGGAAGAAATCTAGAGGAGTCCTTCAGCAGACGGGGGAAGTTGGAGAGACGGTGGAGTCCAGCAGAGGAGCCAGAGAGATAGAACATCTCAATCTGTTTCCTCTGGAGGACTCGTCGGAAAAGAAAGGAAATGCAGAATACCTCAAAGAGAAGAAGGAAGAGAAGGAGAAGCAGGAGCGTGCCATTGGGCTTTTGGTGTCTCTAGGTCCTGCACCTGGAACAGAAGTCACTCCCTGGTACCTGAAAGATGGAAAGGCAAAAGaggaagagagaggaaaaaatgaGAAAAGCAAAACCATGCACAGAAGCTTAACTGAagaggagagagaaaagagagacagGAAGCTGAAAGACATTTTGGATCCTCTTAAGGAAATGAAGAAAGCACTGGCAGTGAAGGATGGGAAGGAGAAAAAGCATAAGAAAAAGGAGAAGAGAGACAGAGGAGAGAAGAGGAGTGGAGAGAGTTCAATTGAAAGGTTACGGGCAGAGCGGCTGCAGAGAGAAGCAGAAGAGAGGAAACGGACACAGGCTTTACTGGAACAGAGGAGCGGAGGCGGAAAAGAAAAAGAGCCTGAGCGAGAGATGGGGGATAGAGACAGACCATACAACAGCGCCTACTTTCCTGAATTGGCAAGGAAAAGGCAAAGGAGAGACAGAGATCAGTATGGCTTTTATTAGCTTACAACACTAATGATTCACTAAGTCTAGAATTTGCAGAACTGTTTCGTGTTCGGACAAGAAATTAAGCCACGTGCAATGTGTGAAGAccgtttaaaataaatgattgctACCTAAAAGCAATCGATCTGCCCTCTGCAACACTTTTATTGGCATCAGATGagttggttttaaaaaaatgtacaaacagGAAATTTTCTTTCTTGCTGTTTTTCTGTGCTGGCGGCACCAGAGCGATTAAATTGTTGTAAAAATGACATCTTTTGATTTGTAGGAACTGCATCAGAGTTGTTTTCCGCTACAGTTCTGAGGCATCAGCATTAAAATGTGGGCCAGCCATTATTATGAGACTAAGAACATCTTCCCTTTAGTGCTGATGCTGGAGCCTGAAATATTTCTCTCCTGTTGTGTAAATGCATTCTACTGTCAGACCCTACAGTGATTATCTTTTTTAtgataaatactttaaaatagtaTATATCACAAATCTGTAGCAATAtttgtgaaaatgtaaataaataaaaaaacatgaaaataatgcACAAAAAA

Function

symbol description
leng1 Orthologous to human LENG1 (leukocyte receptor cluster member 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040912-159 Orthologous to human LENG1 (leukocyte receptor cluster member 1).

Ensembl:

ensembl_id ENSDARG00000037633

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019975 True 1696 mRNA 0.42 4 32051572 32058276

Neighbor

gene id symbol gene type direction distance location
XLOC_010043 tmc4 coding upstream 1419 32029090 ~ 32050153 (+)
XLOC_010042 mboat7 coding upstream 25239 32014552 ~ 32026333 (+)
XLOC_010041 NA coding upstream 66513 31960908 ~ 31985059 (+)
XLOC_010040 phc1 coding upstream 90920 31942527 ~ 31960652 (+)
XLOC_010039 rps9 coding upstream 124050 31921812 ~ 31927522 (+)
XLOC_010045 si:dkey-40m6.8 coding downstream 1509 32059785 ~ 32080875 (+)
XLOC_010046 prpf31 coding downstream 24083 32082359 ~ 32090672 (+)
XLOC_010047 NA coding downstream 34436 32092712 ~ 32095684 (+)
XLOC_010048 sphk2 coding downstream 73292 32131568 ~ 32147182 (+)
XLOC_010049 gprc6a coding downstream 94336 32152612 ~ 32159033 (+)
XLOC_010035 CR855311.5 non-coding upstream 416977 31634470 ~ 31634595 (+)
XLOC_010031 NA non-coding upstream 916141 31121756 ~ 31135431 (+)
XLOC_010030 NA non-coding upstream 956992 31090998 ~ 31094580 (+)
XLOC_010029 BX510336.1 non-coding upstream 1080415 30970501 ~ 30971157 (+)
XLOC_010052 NA non-coding downstream 220723 32278999 ~ 32365571 (+)
XLOC_010053 CR533571.1 non-coding downstream 339231 32397507 ~ 32509458 (+)
XLOC_010055 CR848729.4 non-coding downstream 614544 32672820 ~ 32672936 (+)
XLOC_010060 NA non-coding downstream 1000623 33058899 ~ 33063159 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_09369991_09372314 NA coding CI01000027 null 9369991 ~ 9373307 (+)