CI01000057_04543887_04545600


Basic Information

Item Value
gene id CI01000057_04543887_04545600
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4542871 ~ 4546001 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04543887_04545600.mRNA
ATGTCGGAGCACAAACTGTCCAGTAGAGGGCGCTACACGCACTGCTTTTGCGATGACACGTGACGTAGGGAAAGCATGGCGGAAGTGACGACAGAGGCGCCTAAAGTTTAAATTTGTTTCAGTTGACGGCGAGGGACGTTTGCGTAAACTTGGTTAGTACATTAGTTTGGTATTTGTTATAGTTTTTGAATAATGTCGGAGCAACAGTGTGAAAAAGAGGGTAATAAAATTCTGCATCTTTGAGTTCTTTGTAATGTGCCAGAGTTCGTTATTGGTTCTGACAGCCGCTCCTGTCGACGCTCCTGCTAGTAAACAACGCCTCACTCGACGTCTGTCTGACGCGTTAATGTACAGGATAAATGTGGTTTATTAAAGTATTTTCTTCTGTTTGAGCAGCAGGCATGACTGAAAACACCTTCCCGGTGTACAAGGTGGATGTTATTGTGCAGTTCTACCGAACCGAAGTTCTGACTGGACAAGAGGCTAAACATTTCACGAAGAATGATATTACTCCGAACCCAAAGGCAGAAACCATTCAGAGAGTCTACATGAGAGTTTTGCAGCTTCTGTTTCGTTTCAGACCGGAGTGCCATTACACGGTGCCGCTGTCTGAAAACGTTCAGTACCCAATGCTGTATGAGTGGGTTACTCCCATCATGAGCGTTTACATGCGCATGTGCCAGTTCTTACCGCTTTGTCATGTGTATGATTTTTCCCTGAATGACTTGCTCAACCCCAGTAAGTAGCTTTTATTTTCTCTATCAAGCGTCACACGCAGGGCTCAACAGTGAGAATTATTTCTGCTGCTCGGTCATCTTTTTTTTTTTTTTCTTACTCTGACAACATTTTCACTGGCTGCGCCGCAAAAGAAGTGAGTGGAGAGTGAGTGGATGGTTTATTTTTAACAATGTTCTAGATTGCGTAAGAGGAGGGTTTTTTAACATTACTCCAGATTGTTTTGTAAACAGGCACAATTTAATGCAGGGTTCACAAAGAAACTTTTTAGAAAGATGGAGCTGTGCTTGCATTGCATCGGACAATTTCATAATACTTTCTCTGTAAATAACGGTTTTATTTATTTTTGATAAATTTTGTGATTGCACATGAAATCAGGGTTGTTGTCGTTAATTAAAACCATTAAAAACATTTCTGTAAATTGAAATAAAGCTGAAAAAATAAAATATAAATATTAGTTGAAAAACTTAAACTAAACAGAAATTAGAAATGATGTAGGGGCATGTGAATTAAAAATATGTGTATGGATAAATCTAGAGATGCACCGATGTGTCGGCCGATTTTTGCTCAATTTACAACCATCGGCATATGAGTGTATCTGCGTTATTCAGAGAAACCTCGCAGCTGAACATAATCAATGCATATGATAATGCTTTTAAGATTTAATAATTTTATGCATGGATTACATAATGCAATTAATGTAACATACTTAATTTGTAATTTTAGTCTTGTTTGGATGAAATTTCATATTTATATCTTCTTAACACGATTATAAGGCCGTACAGAGTAAGTGCTTTTTTTTGTGTTCGAGTGCTTTCAGTTGTTCATATATTTTGTCATAAATTTAGAATGGTTTTTAGTACGAAATTTTTGGTGAATTGTGATTTGTTCTTAAAATCATTCCTACACACATTTTGTACGTACGCATGCTTAGTGAATGAGACCCAATAAGAATATAATAATAATAATTTTATATTATTATCATTACAGTAATAATAGCCATAAAACAAATGCACTGCAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04543887_04545600.mRNA True 1762 mRNA 0.37 4 4542871 4546001

Neighbor

gene id symbol gene type direction distance location
CI01000057_04512368_04525620 COMP coding downstream 17251 4511877 ~ 4525620 (-)
CI01000057_04467496_04467864 NA coding downstream 74870 4467473 ~ 4468001 (-)
CI01000057_04455612_04467173 DDX49, DDX49.S coding downstream 75654 4455034 ~ 4467217 (-)
CI01000057_04210090_04214161 NA coding downstream 328710 4209916 ~ 4214161 (-)
CI01000057_04195849_04198909 NDUFA11 coding downstream 343962 4195795 ~ 4198909 (-)
CI01000057_04560576_04573644 NA coding upstream 13639 4559640 ~ 4573644 (-)
CI01000057_04583096_04590861 ISY1 coding upstream 36910 4582911 ~ 4590861 (-)
CI01000057_04597494_04597814 NA coding upstream 51414 4597415 ~ 4597814 (-)
CI01000057_04635274_04644405 NA coding upstream 89216 4635217 ~ 4644405 (-)
CI01000057_04647822_04649004 NPFFL coding upstream 101772 4647773 ~ 4649004 (-)
G246597 NA non-coding downstream 8503 4532796 ~ 4534368 (-)
G246611 NA non-coding downstream 45202 4487312 ~ 4497669 (-)
G246617 NA non-coding downstream 46413 4495587 ~ 4496458 (-)
G246609 NA non-coding downstream 57689 4484909 ~ 4485182 (-)
G246588 NA non-coding downstream 82607 4450002 ~ 4460264 (-)
G246603 NA non-coding upstream 10725 4556726 ~ 4557010 (-)
G246587 NA non-coding upstream 11110 4557111 ~ 4559437 (-)
G246632 NA non-coding upstream 51951 4597952 ~ 4598294 (-)
G246600 NA non-coding upstream 108976 4654977 ~ 4655439 (-)
G246658 NA non-coding upstream 168090 4714091 ~ 4714359 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 645180 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 2621450 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 2737718 1801528 ~ 1806454 (-)
G244358 NA other downstream 3971843 570530 ~ 571028 (-)
CI01000057_04927533_04931127 CDK4 other upstream 382743 4927533 ~ 4931420 (-)
G246780 NA other upstream 665109 5086312 ~ 5283617 (-)
CI01000057_05925181_05926068 NA other upstream 1377539 5923540 ~ 5927295 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location