CI01000057_04718947_04721031


Basic Information

Item Value
gene id CI01000057_04718947_04721031
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 4718918 ~ 4721076 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_04718947_04721031.mRNA
ACTGTGGAAAACATTTCACATCCTGTTCTACAAACACACAGAGGCATGAAAGAATCCAGTTCAGCAGCCCTGCAGGAGGAGACTGGAGACCTGCAGAAACCAGTAAACAATGATATACAGAGAGTCAAAGAGCGGCTCAAAACCAGCATGAAGAAAAAATATGAGAGATTATTTGAAGGAACCAAACCACAAGAGAATGAAACCCTCCTGAACAGGATCTACACACAGCTCTACATCATAGAGGGAGAGAGAAAAGGAGTGAATGAAGAACATGAGGTTTTACAGATGGAGAAAACAGCCAGAACACAACACTCACAAGACACTCCAATTGACTGCAATGACATCTTTAAAGCCTCACCTGAACCAGGATGTGAGGAGAAACACCAAATCAAGACTGTTCTTACTAAAGGCATTGCTGGAATCGGAAAAACGGTCTCTGTGCAGAAGTTCATTCTGGACTGGGCTGAGGGAAAAGCCAATCAGGATGTGGATTTTATATTTGTGCTTCCATTTCGAAAGCTGAAGGATCTGTTCCTGCGATTCCTGCTGGGCGTCTCACTGGAGTCCAATCAGAGACTCTTACAGGATCTACTGACACACACAGAGAACAGCTCAGAGAGCATCAGGAGAACCACACAGTACATTAAAGAGAAGATCAATGATAAAAATGAACTCTCCACTGAAAGATCTATCAATCTGTTCCTCTGTCTGCTGGAAGTCAAAGATCAGACTCTGTCCACAGAGATTCAGAAGTTTGTGAAATCAGACAAACACTCAGAGAAGAAACTCTCTCCTGCTTATTGCTCAACAATCGCCTACATGCTTCAGATATCAGAGGAAATGCTGGATGAGCTGGACCTCAAGAAATACAACACATCAGATGAGGGTAGAAGAAGACTGATACCAGCTGTGATCAATTGCAGAAAAGCCCTTCTTGCTGGATGTAATCTCAACAAACAGTCATGTGAAATTGTGTCATCAGCTCTACAGTCCTCAAACTCTGTCCTGAGAGAGCTAGACCTGAGTAACAATGACCTACTGGATTCAGGAGTGAAGTTGCTTTCTGATGGACTGAAGAGTCCAAACTGTCAGCTGGAGATACTGAGGTTGTCAGGCTGTATGGTGACAGAGGAAGGCTGTGGTTATGTGTCTTCAGCTCTGAGTTCAAACCCCTCACACCTGAGAGAGATGGATCTGAGCTACAATCACCCAGGACAATCAGGAGTCCAGCTGCTCAACGACAAACTGAATGATCCAAACTACAAACTGCAGATACTCAATTTGGATCATGGAGGGCCCTTCAGGATAAAACCAGGACTACAAAAATGTAGGTTCTTTCTCTGACTCACTCTTGCACATTTAATGGAAATAAA

Function

NR:

description
hypothetical protein cypCar_00045980, partial

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_04718947_04721031.mRNA True 1373 mRNA 0.44 4 4718918 4721076

Neighbor

gene id symbol gene type direction distance location
CI01000057_04657451_04663499 NRAMP-BETA, SLC11A2, NRAMP-ALPHA coding downstream 55419 4657262 ~ 4663499 (-)
CI01000057_04647822_04649004 NPFFL coding downstream 69914 4647773 ~ 4649004 (-)
CI01000057_04635274_04644405 NA coding downstream 74513 4635217 ~ 4644405 (-)
CI01000057_04597494_04597814 NA coding downstream 121104 4597415 ~ 4597814 (-)
CI01000057_04583096_04590861 ISY1 coding downstream 128057 4582911 ~ 4590861 (-)
CI01000057_04728914_04731946 NA coding upstream 7796 4728872 ~ 4733723 (-)
CI01000057_04743808_04746558 NA coding upstream 22330 4743406 ~ 4748097 (-)
CI01000057_04787300_04788191 NA coding upstream 65636 4786712 ~ 4788191 (-)
CI01000057_04794580_04834143 COL2A1 coding upstream 72441 4793517 ~ 4834429 (-)
CI01000057_04861618_04865902 ITGA7 coding upstream 140542 4861618 ~ 4865902 (-)
G246658 NA non-coding downstream 4559 4714091 ~ 4714359 (-)
G246600 NA non-coding downstream 63479 4654977 ~ 4655439 (-)
G246632 NA non-coding downstream 120624 4597952 ~ 4598294 (-)
G246587 NA non-coding downstream 159481 4557111 ~ 4559437 (-)
G246603 NA non-coding downstream 161908 4556726 ~ 4557010 (-)
G246662 NA non-coding upstream 3440 4724516 ~ 4725178 (-)
G246669 NA non-coding upstream 28739 4749815 ~ 4750141 (-)
G246676 NA non-coding upstream 59690 4780766 ~ 4781052 (-)
G246691 NA non-coding upstream 80596 4801672 ~ 4804379 (-)
G246703 NA non-coding upstream 141728 4862804 ~ 4863182 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 821227 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 2797497 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 2913765 1801528 ~ 1806454 (-)
G244358 NA other downstream 4147890 570530 ~ 571028 (-)
CI01000057_04927533_04931127 CDK4 other upstream 207668 4927533 ~ 4931420 (-)
G246780 NA other upstream 490034 5086312 ~ 5283617 (-)
CI01000057_05925181_05926068 NA other upstream 1202464 5923540 ~ 5927295 (-)

Expression


Co-expression Network