XLOC_010080


Basic Information

Item Value
gene id XLOC_010080
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34315762 ~ 34321379 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021976
AGAGGAAGAGGGAGAGAAGATGAGGTGAACCATCCAACTTCAATTTCGGCTGgGGAACAGAAATTCTTGCGGAAGCCCAGATAATTGACTCTATGCTGCAATCTTTTTCTCCCGGAAACTATAAAAGCTGTTTTGCACAGGCCATGAATGCCTCCCACACAGCTCACATCAGTCCACCTGCTCGGGTCCCTGTGGGAGAGCTAGAAAACTGGAATCAAAGAGGCATGAATGAACACACTGCACCATCTGCTGGTCATCAATCACAGCACACCAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021976 True 274 lncRNA 0.49 2 34315762 34321379

Neighbor

gene id symbol gene type direction distance location
XLOC_010079 oprd1b coding upstream 141502 34160835 ~ 34174260 (+)
XLOC_010078 tcea3 coding upstream 180518 34111919 ~ 34135244 (+)
XLOC_010077 tent5ba coding upstream 259319 34046733 ~ 34056443 (+)
XLOC_010076 zdhhc18a coding upstream 309427 33992319 ~ 34006335 (+)
XLOC_010075 pigv coding upstream 325038 33987892 ~ 33990724 (+)
XLOC_010082 NA coding downstream 157618 34478997 ~ 34502203 (+)
XLOC_010083 paqr7b coding downstream 201598 34522977 ~ 34532888 (+)
XLOC_010084 stmn1b coding downstream 202136 34523515 ~ 34527206 (+)
XLOC_010085 AL929184.1 coding downstream 403189 34724568 ~ 34724682 (+)
XLOC_010086 NA coding downstream 591905 34913284 ~ 34916253 (+)
XLOC_010070 BX530064.2 non-coding upstream 559383 33752102 ~ 33756379 (+)
XLOC_010067 AL954832.1 non-coding upstream 972497 33343151 ~ 33343265 (+)
XLOC_010066 NA non-coding upstream 1021982 33250490 ~ 33293780 (+)
XLOC_010065 NA non-coding upstream 1101225 33180106 ~ 33214537 (+)
XLOC_010060 NA non-coding upstream 1252603 33058899 ~ 33063159 (+)
XLOC_010087 CR385021.1 non-coding downstream 885476 35206855 ~ 35280788 (+)
XLOC_010093 NA non-coding downstream 1234387 35555766 ~ 35556976 (+)

Expression


Co-expression Network