XLOC_010093


Basic Information

Item Value
gene id XLOC_010093
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 35555766 ~ 35556976 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021984
ttgtaaagctccaatctttttattttgaagcttttgGAGTATAACGCTGTTGTTGTATGCACTCTAACCATGTTGTATAAAAAGTACAAACAACAAAGACAATGTAAACATCAACACAATATGAAATACAGGCAGTggggctgcagtcacactagactTCCTGTCACATGCATCTGAACGCAAGTGCATACTAAAAGGTCTGCTGCTTTGTTTTGACCTGCTAATTGGTATGAGAAAAACACATCTGGCTAACAGAAGATCTAAATGCCACTGACTGACCTTGACACAAcgaaaataaacttaaatactgAACCGTCTGCAGTGCTGCTACAAAGGGGAGTGGATTTCGAACATAGACGAAACATTTCGAACCATGTTATTTGCCAATTTACAGTTGATTCAAACAGATGGCATGGATCCTGCTGCACATATTTGATAACTGACCAATATATTCGGATGCTCAAAGTCTAGTGTGGCCGCATCGTAACTTCTAAATGCGTAAAGTGTATAAAGTGGATGAGTTGTGGTCTTTTAGGTGTCCGTCCGGAGCGATCTCCAGCATGATGGAAGAGTTCTAGTGTTTATTTGGAGTTGATCAGTCTCGTATAAAAGCCGTAGAAAACACCATCATTGATGTACGatgaaaaaatatacaattaaatgtaCGTCTCAAAAACCGAGGCCCAAAAACGGCCTGTATACTGTCCACTTCACTGTTTCAGTCAAGTTTGAACAGGTAAAATGTTCTAGAACAATGCAACCGTAAGTGTAACGTGAGAATAACCGTAAGAACATCAGTTATAAAAAACGATTATAACAGTGCTATAATTAATAACCGAATTCACTAAAAACAGGAAAAAGTGTTGAATGAAATGGAGGGACAAGAGGCAGGAGAAAAGCTTTACAATCCTCTGCTACAGTACTGGGGGACTTAAAAATCCCAGCATGCCGTGTGTTTTGAAATGTGCTTAGAAGGGGTATTGTTTGAGGTTGAGAGAGTGCCATCATGGTAAATGCCCCTCCTTCAGTCTGTCAATGTGGAAGGAGAGTTTAAGGGCAGGACCCAACTTTAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021984 True 1074 lncRNA 0.40 2 35555766 35556976

Neighbor

gene id symbol gene type direction distance location
XLOC_010092 cited4b coding upstream 18275 35535171 ~ 35537491 (+)
XLOC_010091 rab42b coding upstream 149879 35401543 ~ 35405887 (+)
XLOC_010090 si:dkey-34d22.5 coding upstream 157254 35395597 ~ 35398512 (+)
XLOC_010089 si:dkey-34d22.2 coding upstream 172644 35379720 ~ 35383122 (+)
XLOC_010088 si:dkey-34d22.1 coding upstream 176201 35343493 ~ 35379565 (+)
XLOC_010094 si:ch211-1i11.3 coding downstream 36809 35593785 ~ 35644767 (+)
XLOC_010095 map7d1a coding downstream 104355 35661331 ~ 35776074 (+)
XLOC_010096 AL773558.2 coding downstream 169042 35726018 ~ 35726132 (+)
XLOC_010097 NA coding downstream 220699 35777675 ~ 35780839 (+)
XLOC_010098 NA coding downstream 258413 35815389 ~ 35817061 (+)
XLOC_010087 CR385021.1 non-coding upstream 274978 35206855 ~ 35280788 (+)
XLOC_010086 NA non-coding upstream 639513 34913284 ~ 34916253 (+)
XLOC_010085 AL929184.1 non-coding upstream 831084 34724568 ~ 34724682 (+)
XLOC_010082 NA non-coding upstream 1053563 34478997 ~ 34502203 (+)
XLOC_010081 NA non-coding upstream 1232759 34319889 ~ 34323007 (+)
XLOC_010101 NA non-coding downstream 476442 36033418 ~ 36038394 (+)
XLOC_010103 NA non-coding downstream 654804 36211780 ~ 36218004 (+)

Expression


Co-expression Network