Gene
RNA
| Item | Value |
|---|---|
| gene id | G246658 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 4714091 ~ 4714359 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU279934 | True | 269 | lncRNA | 0.29 | 1 | 4714091 | 4714359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_04657451_04663499 | NRAMP-BETA, SLC11A2, NRAMP-ALPHA | coding | downstream | 50592 | 4657262 ~ 4663499 (-) |
| CI01000057_04647822_04649004 | NPFFL | coding | downstream | 65087 | 4647773 ~ 4649004 (-) |
| CI01000057_04635274_04644405 | NA | coding | downstream | 69686 | 4635217 ~ 4644405 (-) |
| CI01000057_04597494_04597814 | NA | coding | downstream | 116277 | 4597415 ~ 4597814 (-) |
| CI01000057_04583096_04590861 | ISY1 | coding | downstream | 123230 | 4582911 ~ 4590861 (-) |
| CI01000057_04718947_04721031 | NA | coding | upstream | 4559 | 4718918 ~ 4721076 (-) |
| CI01000057_04728914_04731946 | NA | coding | upstream | 14513 | 4728872 ~ 4733723 (-) |
| CI01000057_04743808_04746558 | NA | coding | upstream | 29047 | 4743406 ~ 4748097 (-) |
| CI01000057_04787300_04788191 | NA | coding | upstream | 72353 | 4786712 ~ 4788191 (-) |
| CI01000057_04794580_04834143 | COL2A1 | coding | upstream | 79158 | 4793517 ~ 4834429 (-) |
| G246600 | NA | non-coding | downstream | 58652 | 4654977 ~ 4655439 (-) |
| G246632 | NA | non-coding | downstream | 115797 | 4597952 ~ 4598294 (-) |
| G246587 | NA | non-coding | downstream | 154654 | 4557111 ~ 4559437 (-) |
| G246603 | NA | non-coding | downstream | 157081 | 4556726 ~ 4557010 (-) |
| G246597 | NA | non-coding | downstream | 179723 | 4532796 ~ 4534368 (-) |
| G246662 | NA | non-coding | upstream | 10157 | 4724516 ~ 4725178 (-) |
| G246669 | NA | non-coding | upstream | 35456 | 4749815 ~ 4750141 (-) |
| G246676 | NA | non-coding | upstream | 66407 | 4780766 ~ 4781052 (-) |
| G246691 | NA | non-coding | upstream | 87313 | 4801672 ~ 4804379 (-) |
| G246703 | NA | non-coding | upstream | 148445 | 4862804 ~ 4863182 (-) |
| CI01000057_03887278_03892054 | ABHD8B, ABHD8 | other | downstream | 816400 | 3887203 ~ 3892054 (-) |
| CI01000057_01904867_01921400 | NA | other | downstream | 2792670 | 1904533 ~ 1921905 (-) |
| CI01000057_01801708_01806454 | LHFPL5, LHFPL5A | other | downstream | 2908938 | 1801528 ~ 1806454 (-) |
| G244358 | NA | other | downstream | 4143063 | 570530 ~ 571028 (-) |
| CI01000057_04927533_04931127 | CDK4 | other | upstream | 214385 | 4927533 ~ 4931420 (-) |
| G246780 | NA | other | upstream | 496751 | 5086312 ~ 5283617 (-) |
| CI01000057_05925181_05926068 | NA | other | upstream | 1209181 | 5923540 ~ 5927295 (-) |
