XLOC_010108



Basic Information


Item Value
gene id XLOC_010108
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 36560692 ~ 36591341 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021989
cgaagggttactttagtaacctcgaacgttacctGCAAGCTCATCCAACTTATTCCCTAAGGACCGAACATTTCCCATGATCACGGAGGGGAGCGGGGTGCGAGTCACCTGTTGTTTTCTTAAGCGTTGCCTAACGCCCCCTCGCTTACCTCGCTTCCTCATCTTGGCCTTCGGCTTTGTTTCCCGCGTTCCATCGGACACTTTCCGTACCACATTTGGTAAATAAATGTCTGAAATTGTCTCTACCCTTAAAGGGTTTAATTGCAACAGCGTGCTCCTGGTATACTGTATCCTTCCATGATTAACAACTCCGTGAGCATATTCACCAGCAAGCAGAAGATAAACCGGTTCCCATAACAACGTGAGAAATAAAATCTCCATTGTAGATAGATTGCACACGAATATATTAAAATACTATCCCATAAACAATTAAAAAGAGAAGAGCGGACACATAAAGTCTAAATTGTTAAAAACAaagtgttaaaaaacaaaacacaagcacTAGTCCCATGCCAAACTCTCACTGCTGGTCGGTGCGTGCGCATGCGCCCTTCCGTTGTATGTAAAGCTCCAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021989 True 574 lncRNA 0.44 2 36560692 36591341

Neighbor


gene id symbol gene type direction distance location
XLOC_010107 NA coding upstream 2812 36548027 ~ 36557880 (+)
XLOC_010105 NA coding upstream 203590 36282260 ~ 36357102 (+)
XLOC_010106 NA coding upstream 212117 36345983 ~ 36348575 (+)
XLOC_010104 NA coding upstream 220783 36238471 ~ 36339909 (+)
XLOC_010103 NA coding upstream 342688 36211780 ~ 36218004 (+)
XLOC_010110 NA coding downstream 14701 36606042 ~ 36608974 (+)
XLOC_010111 col6a4a coding downstream 59643 36650984 ~ 36719705 (+)
XLOC_010112 decr1 coding downstream 157197 36748538 ~ 36760156 (+)
XLOC_010113 si:ch73-215d9.1 coding downstream 177333 36768674 ~ 36931828 (+)
XLOC_010114 NA coding downstream 363747 36955088 ~ 36958828 (+)
XLOC_010116 NA non-coding downstream 1042106 37633447 ~ 37641863 (+)
XLOC_010117 NA non-coding downstream 1068179 37659520 ~ 37660611 (+)
XLOC_010118 NA non-coding downstream 1121923 37713264 ~ 37713637 (+)

Expression



Co-expression Network