CI01000058_00043409_00059894


Basic Information

Item Value
gene id CI01000058_00043409_00059894
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 43409 ~ 60422 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00043409_00059894.mRNA
ATGCGTACCCGCCTCAATGTCCTGAAACCCTCACCTTCTGGTCATGAGCCTAAACAACTGCAGAAGCGTGTTTCATCACATCAGGATGTCATGAAATCTCGCTTTGACCACAAGCATCGAGTGCGCCATTTTTCTTTCCAAAAAGGGGATAAAGTGCGCATTAAAAAGTCAGTACATGTCCCAAAAGCCCATCCAAAATTCACTCCTCCAGTTGAGGTTAGGAAAAAAGTTGGCCCTTACACCTACCTCTTGGATGATGGAAAGAAGTGGCATGCATCGTGTCTTGCACCCGTGCCGACTAAAGCGCTGGATAATGGACTGACCATCAATGCTGAAAACTTGATTCCCTCTCATGTTCCATTGTCTGGAAATTCAGTGTCTTCTGATGCTTGTCCACGGGAGAGACGTCAAAGACGTGAGCCAGCACAATTTCAGCTTTGCACTCTGCAAGTTTTGGGGGTTATCAACATCATTTCTGGCTGCTGTCCCATGTTAGTTGCAACTTTTAACTCTATCCAATTATTTGCCATGCCTCTAAGGCGAGGGGCTGCTTATCGTGTGAATGATGCACGTATAGATGATGAAGGGCCATGCAGAGCCTGTGCCAACATGAGAACCCTAGCTGCAGTCTCTGCACTCGGCTCGCAGCTCTACCACGGGGAGGAGAGCATGATGAGCCGGGCTTATGAGGATAAGCTGTTCTTCTTTCTTTGCTGCCACTCGGTGTCGTGGGCGGAGGGGAATGCCGGCAGCCCTGTGATACTGGGTGGCCATAAGAGTGTTACTAAACTAATGTACGCTGTGCTAACATTAGAAGTTGTGGAGGCTATTGTGGCAATGCAGAGCAGTAAAGCTTCAGGACCTGATGGTTTCCCGATAGAGTTTTATAAGAAGTCTGCAGCTTTACTGGGCCCACTTCTTGTGGCAGTTTATAATGAGTCTTTTAATACTGGAACTCTTCCTTTAACACTTACGCAAGCCTCAATTTCTCTTATCCCAGAGAAAGGCAAGAATCCTCCTCATTGCAAATCATACAGGCCAATCTTGCTTCTGAATGTGGATTTAAAAATTTTATCCAAAATTCTTGTGTTCTCCCTACTATAATTTCAAACGACCAAACAGGATTTATTCGAGGCCGTAACCCCTTTAATAATTTACAACGCCTATACAATGTAATTTACACAAATTCTCCCCCAGGTGAACATGAAGCAGTAATATCTCTCGACACTGAAAAGGTGTTCGATAGAGTAGAGTGGGAATACCTTTTTAACACATTTAAACAGTTTGGTTTTCATGCAGACCTAATCTCGTGGTTTAGACTGTTATATACCTCCCCGGTTGCTTCTGTTTGCACAAACAACGTACAGTCTGAGTGTTTCCCCCTACACCGGGGCACCAGGCAAGGGTGCCCTCTCTCTCCCTTGTTATTCCCCATATCAACTGAACCCTTGGCTACTGCGCTCCATCAGTCTTCTAATTTTAAAGGTATTACACGGCATGGTACAGAGCATAAAATTTCCTTATATGCAGATGATGTTTTATTATATGTAAGAAGCTCAACCTCCTCAATACCTCAAATTATTTTACTATTAAAGGAGTTTGGCAAGTTTTCTGGCTATAAGCTTAACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00043409_00059894.mRNA True 1632 mRNA 0.44 5 43409 60422

Neighbor

gene id symbol gene type direction distance location
CI01000058_00021632_00039608 NA coding upstream 3439 21480 ~ 39970 (+)
CI01000058_00104333_00105839 NA coding downstream 43911 104333 ~ 106724 (+)
CI01000058_00241253_00245763 NA coding downstream 180831 241253 ~ 246107 (+)
CI01000058_00313907_00314170 NA coding downstream 253335 313757 ~ 314670 (+)
CI01000058_00333202_00355871 PANK4 coding downstream 272618 333040 ~ 355875 (+)
CI01000058_00382692_00395743 NA coding downstream 322270 382692 ~ 395774 (+)
G247176 NA non-coding downstream 1448 61870 ~ 62126 (+)
G247192 NA non-coding downstream 82333 142755 ~ 143591 (+)
G247257 NA non-coding downstream 167475 227897 ~ 228534 (+)
G247300 NA non-coding downstream 255557 315979 ~ 316343 (+)
G247309 NA non-coding downstream 271840 332262 ~ 332527 (+)
CI01000058_00435196_00437830 AGTRAP other downstream 374620 434913 ~ 455744 (+)
CI01000058_00592498_00596709 NA other downstream 531909 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 1168187 1278592 ~ 1289874 (+)
G247940 NA other downstream 1392575 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1735291 1794468 ~ 1800421 (+)

Expression


Co-expression Network