CI01000058_00241253_00245763


Basic Information

Item Value
gene id CI01000058_00241253_00245763
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 241253 ~ 246107 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00241253_00245763.mRNA
ATGATGCCGAAAACAGCCCTGCTAGCACTGTGCTGCCTGTTATTGTCAGTTACTTCTTCCCCAGTCTATCCAGCACTGAGGTTTGGTCAGCGAGCGGCTGCGATACTGATGACCTCCTCTATTGAGGATCCGATGCAGTTTCCAGCAGGCACTTCACTGCGCACACCAGATGCTGAGCTTAGGTTTGGAAGACATGCTGACGCCATCTTTACCAACAGCTACCGAAAAGTTCTCGGTCAAATATCTGCCAGAAAATTCCTTCAAACTGTCATGGGCAAAAGACTTGGACCAGAAACTCAAAACTATGTAAAACGCCAATCCGGCATATATGGAGACACCCACAAGCAAGATGTGGATATGGATGTCACTGAGAGGGAACAAAGTTACAGAGCACCACAAAGACTTAAGTTCTCAGTAGCTACACACTGATGAAATCATTAAAAAAACAAAAAAACAAACAAACAAAAAAAAAAACTGTGAACTGTCTTTATTACTTGCATTTGCTACATTTCACTCTGGATTATTAAAATTCAGTTCACCCTTCCTACAGGATCCTGTGCACTATGTGTGTTTGTGCACTGACACCAGTCAGTGTTCAGAAGGTCTGCCACAGAAATAAGGAGTCCCTAACTAAAAATACACAAATGTTTATATCACTGTATTTTACATCCAATCCTTAGCAAGTACATATTGTTGTATAGTGGGATAATTGACTATTCCCTAAGCCACTTTAAAACACTAATGAAAAATCCTACATTAAGATCTCTTGCCAA

Function

NR:

description
growth hormone-releasing hormone precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00241253_00245763.mRNA True 773 mRNA 0.41 4 241253 246107

Neighbor

gene id symbol gene type direction distance location
CI01000058_00104333_00105839 NA coding upstream 134529 104333 ~ 106724 (+)
CI01000058_00043409_00059894 NA coding upstream 180831 43409 ~ 60422 (+)
CI01000058_00021632_00039608 NA coding upstream 201283 21480 ~ 39970 (+)
CI01000058_00313907_00314170 NA coding downstream 67650 313757 ~ 314670 (+)
CI01000058_00333202_00355871 PANK4 coding downstream 86933 333040 ~ 355875 (+)
CI01000058_00382692_00395743 NA coding downstream 136585 382692 ~ 395774 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 188806 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 220526 466633 ~ 482017 (+)
G247257 NA non-coding upstream 12719 227897 ~ 228534 (+)
G247192 NA non-coding upstream 97662 142755 ~ 143591 (+)
G247176 NA non-coding upstream 179127 61870 ~ 62126 (+)
G247165 NA non-coding upstream 186615 54196 ~ 54638 (+)
G247163 NA non-coding upstream 188151 52884 ~ 53102 (+)
G247300 NA non-coding downstream 69872 315979 ~ 316343 (+)
G247309 NA non-coding downstream 86155 332262 ~ 332527 (+)
G247314 NA non-coding downstream 175023 421130 ~ 421530 (+)
G247293 NA non-coding downstream 179651 425758 ~ 426095 (+)
G247316 NA non-coding downstream 181140 427247 ~ 427462 (+)
CI01000058_00592498_00596709 NA other downstream 346224 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 982502 1278592 ~ 1289874 (+)
G247940 NA other downstream 1206890 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1549606 1794468 ~ 1800421 (+)

Expression


Co-expression Network