CI01000058_00313907_00314170


Basic Information

Item Value
gene id CI01000058_00313907_00314170
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 313757 ~ 314670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00313907_00314170.mRNA
GTATTTATGCACCTGCTGCCTTTTGATGGTGAGAAGTACAGACTAAACAAAAACAAGGTAAGTGGATTTAAACACTTGAATGCCATCCTGCTGGTCATTTCACGGTGAGAAGAGCAGCAAGCAACATGACAAAGGGATTGACTTTTAGAAATGATTATGCAGCCTGACCCCTCCAGCGAGCTGCAGGATTTAGTGTCTTCTCCCTCTGACACCACAGACTCAGGAGAGTCAGATCCTGATTTTGTTGTGGCACCCTCATCATCCTCTACAGCTTCCACTGAAAGTGAGGAGGATTCAGAGGATCCTGGATCTGGGTGGATTGGGAGAAGCGGCGAAGTGTGGTTTTCCACCAACGTGGAGAAAACTCCCTTTCTTCAGCCTGCCAGAGGCGTGACTCCAGGACCGACACATTAAGGCAGGAACACACCAAGCCGACACCGACGAAATAGTGGCGACGAAAGCAGACTGCAGGGTTGGCTCACGTCGGCAGGGTCTGGGTCCAAAGTTGCCCTGACACACCAAACCGACGCTCAACAGCCGACGGCCAAGTAGCACGTCCGTTCTGCGCCTGCATAAGATGAAATGCCTTTCCGTACCAGCAGGTGGCAGTAGCTGATTCAACATGTCGAATCGGCCAAAAAAAAAAAAAAAAAAAAAAAAACGGATGAGGACCAACTTCAGCCAACAGTAAGGAACACATTGAGAAACCTTAGTCGGCCGAGGAACAAAAACTAACCGACGGCCGACTGTCGGCTTGGTGTGTTACTGCCTTTATGCCATCGCAAGGGTCCAGAATGTGGATTCTGTGTTCAATCTGTTTTTTACGGAGGAGATGATTGACCTCATTGTCAGCATGACTAACCTCCATAGGCGCCTCACAATGAGAAACTGGAGTTGTTGCACTTTGGTTCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00313907_00314170.mRNA True 914 mRNA 0.49 1 313757 314670

Neighbor

gene id symbol gene type direction distance location
CI01000058_00241253_00245763 NA coding upstream 67650 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 207033 104333 ~ 106724 (+)
CI01000058_00043409_00059894 NA coding upstream 253335 43409 ~ 60422 (+)
CI01000058_00021632_00039608 NA coding upstream 273787 21480 ~ 39970 (+)
CI01000058_00333202_00355871 PANK4 coding downstream 18370 333040 ~ 355875 (+)
CI01000058_00382692_00395743 NA coding downstream 68022 382692 ~ 395774 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 120243 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 151963 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 202480 517150 ~ 528807 (+)
G247257 NA non-coding upstream 85223 227897 ~ 228534 (+)
G247192 NA non-coding upstream 170166 142755 ~ 143591 (+)
G247176 NA non-coding upstream 251631 61870 ~ 62126 (+)
G247165 NA non-coding upstream 259119 54196 ~ 54638 (+)
G247163 NA non-coding upstream 260655 52884 ~ 53102 (+)
G247300 NA non-coding downstream 1309 315979 ~ 316343 (+)
G247309 NA non-coding downstream 17592 332262 ~ 332527 (+)
G247314 NA non-coding downstream 106460 421130 ~ 421530 (+)
G247293 NA non-coding downstream 111088 425758 ~ 426095 (+)
G247316 NA non-coding downstream 112577 427247 ~ 427462 (+)
CI01000058_00592498_00596709 NA other downstream 277661 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 913939 1278592 ~ 1289874 (+)
G247940 NA other downstream 1138327 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1481043 1794468 ~ 1800421 (+)

Expression


Co-expression Network