CI01000058_00382692_00395743


Basic Information

Item Value
gene id CI01000058_00382692_00395743
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 382692 ~ 395774 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00382692_00395743.mRNA
TCTTAAATGCAGGGATAGATGCCTGCTGCTTGAGGCAATGTGAGCAGCTCTCAGGGACAAAAGACAGAGTGAAGGGGCCAGATTTACTGAGGGGAGCATCTGAGGATGAGAGGAGACCTAGGATGATCAAACAGGTGGCGCTGTATTTGAAGATGGCAGCTCCAGGCTTATGTTGTCTCTTTGCCCTGCTCCTTATCACACTGTCCCACACCTCGCACAGCTCTGAGATCCCATCTGAAAATGCCAAACGGAGTATGACCAGGTCTTCTACCTCCACCACTGACTCCAAGTCAGACCCTGACATGGGACTTCTGGGCGGCAACCAGCGAAGAAAACACTGGTCACGTAAAGACAGGGATAATGCTGGACTGCTCTCTCGAAGGCCTGTGGACCGACCGGAGGATGATGGGACAAGTCTAGAGGGCCTGAGCCCTGTAAGGCTGGAGATGGAGCCTGGGGACAGTATGAGGGTGGAGGTTCATGATGAAGTCAGGGGCCCTGCTCATATGCGGCGTGGAAATCATCCACCAGAGGGAGAGTTCAATCGTAAAGGCAGGAGACATGGCCACGGGCATCTGGCTGAGCACAGAAAACAGGGAGGCAAAAGAGACAAAGGCCGAGCTAAAGGGGATCTCTATGACCCTGAACCAGAATTAGGCTCCATGCTGAAGGACACGAATGCATTTGAGGATGTTCTTTACACCTCCCCACCCAATTACGACAATGCTCCACTCACTGAAGCTCCCTCCCACCTCTCCCCCATTTTGGTAACCACAGCAATCAACGAGCATCCCCCAACACTGCCCCCAGCCTCCACCAAACCCCAGATATCTTTTTACCACTCCCTGTATTTATTTAAATTCCCTTGAGAGGCATCACTAGGCCTGGGTACATATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00382692_00395743.mRNA True 900 mRNA 0.52 4 382692 395774

Neighbor

gene id symbol gene type direction distance location
CI01000058_00333202_00355871 PANK4 coding upstream 26817 333040 ~ 355875 (+)
CI01000058_00313907_00314170 NA coding upstream 68022 313757 ~ 314670 (+)
CI01000058_00241253_00245763 NA coding upstream 136585 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 275968 104333 ~ 106724 (+)
CI01000058_00043409_00059894 NA coding upstream 322270 43409 ~ 60422 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 39139 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 70859 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 121376 517150 ~ 528807 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding downstream 133411 529185 ~ 544027 (+)
CI01000058_00548398_00567030 NWD1 coding downstream 152053 547827 ~ 567172 (+)
G247309 NA non-coding upstream 50165 332262 ~ 332527 (+)
G247300 NA non-coding upstream 66349 315979 ~ 316343 (+)
G247257 NA non-coding upstream 154158 227897 ~ 228534 (+)
G247192 NA non-coding upstream 239101 142755 ~ 143591 (+)
G247176 NA non-coding upstream 320566 61870 ~ 62126 (+)
G247314 NA non-coding downstream 25356 421130 ~ 421530 (+)
G247293 NA non-coding downstream 29984 425758 ~ 426095 (+)
G247316 NA non-coding downstream 31473 427247 ~ 427462 (+)
G247317 NA non-coding downstream 32670 428444 ~ 433463 (+)
CI01000058_00592498_00596709 NA other downstream 196557 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 832835 1278592 ~ 1289874 (+)
G247940 NA other downstream 1057223 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1399939 1794468 ~ 1800421 (+)

Expression


Co-expression Network