CI01000058_00870909_00930600 (ADGRL2A, ADGRL2)


Basic Information

Item Value
gene id CI01000058_00870909_00930600
gene name ADGRL2A, ADGRL2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 870909 ~ 930600 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_00870909_00930600.mRNA
TTTAGCCGGGCAACTATGCCGTTTGGTCTGGTGAGGCGGGAGCTGTCTTGCGAGGGTTATCCCATCGACCTACGCTGTCCAGGAAGTGATGTCATCATGATCGAGACTGCCAATTACGGCCGGACAGATGACAAGATCTGCGATGCTGACCCCTTTCAAATGGAGAACATCAACTGTTATCTGCCCGATGCATTCAAGATCATGTGTAACAACAGAACGCAATGCATCGTCATCACTGGACCAGATGTTTTTCCTGACCCCTGCCCAGGAACGTATAAGTACCTTGAAGTCCAGTATGAATGTGTTCCCTACATTTTTGTTTGTCCCGGAACTCTGAAAGCGGTTGGAGATCCGTCGTTTCTTTACGAGGCGGAGCAACAAGCGGGGTCGTGGTGCAAAGACCCCCTCCAGGCAGGAGACAAGGTTTATTTCATGCCCTGGACCCCTTACAGAACAGATACACTTATTGAGTACAACTCGCTCGACGACTTTCAAAACTCTCGACAGACTACGACATATAAACTCCCCCATCGGGTTGACGGCACAGGATTTGTTGTATACGATGGCGCAGTGTTTTTTAACAAGGAAAGGACTCGTAACATTGTTAAATTTGACCTTCGGACCAGAATTAAAAGCGGGGAGGCAATTATAAATAACGCAAATTATCATGACACCTCACCTTATAAGTGGGGCGGGAAAACAGACATCGACTTGGCGGTAGATGAAAATGGCCTTTGGGTGATCTACGCCACTGAGCAGAACAACGGTATGATGGTGATCAGTCAGCTCAACCCCTACACCCTTCGCTTTGAGGCAACCTGGGAGACCACATACGACAAGCGCTCGGCCTCCAATGCTTTCATGATCTGCGGGGTTCTGTATGTTGTCCGATCCACATATGAAGACAACGAGAGCGAGGTTAGCAAGAGCCTGATTGACTACATGTACAACACCAAATTGAACCGAGGCGAGTACGTCGACATCCACTTCCCCAACCAGTACCAGTATATTGCCGCTGTGGAATACAACCCCCGAGACAACCAGCTGTATGTGTGGAATAACTATTACATCCTGCGGTACAATCTGGTGTTTGGACCACCTGATCCAGCTCACGCACCACCTATCTCAGAGGCATCCACAACACCAAAGTTACTAAAACCAACAACCATTACAGCAACCACTACTCAACCGAGAGGTCAGGTGACTACTGTTACCACTACAGGGACCAGAGCTGTTAATAAGACACCCAAATCACCAGCTGTACTTCCCCAAACCACCACACCACCCTCGCTGGAGTCCTTCCCTCCACCTGAGCGCTTCTGTGAGAGCGTAGAGCTTAGGGACATACTGTGGCCGCAGACGCAAAGGGGCATGCTGTTGGAACGACCCTGCCCCAAAGGAACTCGAGGCACTGCCTCCTACCTATGTGTTCTCTCCACTGGGACCTGGAACCCAAAAGGCCCAGATCTGAGCAACTGTACGTCCCACTGGGTGAATCAAGTCGCTCAAAAGATCCGGAGTGGGGAAAACGCAGCCAACCTGGCGAACGAGCTGGCCAAACATACCAAAGGAGCCATTTTTGCCGGTGACATTAGCTCTACCATGAGGCTCATGGAGCAGCTGGTGGATATTCTAGACGCTCAGTTACAGGAACTGCGACCCAGCGAGAAAGACTCCACCGGCCGCAGCTTCAATAAGCTTCAAAAGCGAGAAAGGACGTGCAGAGCGTATATGAAGGCTATCGTGGATACAGTCGACAACCTCCTCAGACCGGAGGCTCTGAAATCGTGGCGAGATATGAATACCACGGAGCAGACGCACGCCGCAACTATGTTACTGGACACCCTGGAGGAAGGAGCCTTTGTCCTTGCTGACAATTTAATGGAACCGGCCATCGTGAAAGTACCAGCCAATAATATAATTCTGGATGTTTACGTGCTGAGCACAGATGGGCAGGTTCAAGATTTCAGGTTTCCCCAGAGCGGCAGGGGTGGTATTTCTATCCAATTGTCTTCCAATACTGTGAAGCTCAACAGTCGTAATGGTGTTGCCAAGTTGGTTTTTGCCCTTTATAAGAACCTGGGGCAATTTCTAAGCACTGAGAATGCAACAGTGAAGCTCGGCCACGAGTCTAACGGACGCAACCTCTCCGTGGCTGTGAATTCCGACGTCATTGCTGCCTCAATAAACAAAGAATCCAGTCGTGTATTTATATCGGAGCCTGTGATTTTCACCCTGGAGCACATCGACATGCAGCACTACTATAACTCCAACTGCTCTTTCTGGAACTACTCCGAGAGAACCATGATGGGATACTGGTCCACTCAGGGCTGCAAACTCATCCACGCCAATAAAAGTCACACCACCTGCTCCTGTAGTCATCTCACTAACTTTGCGGTGCTCATGGCTCATCGAGAGCTGCTGGGTGCAGATAAAGTCCAGGAGCTCTTGTTGAGCGTCATCAGTCGTGTGGGCATCGTGGTATCCCTTATCTGTCTGGCCATGAGTATCTTCACCTTCTGTTTCTTCCGTGGGCTACAGAGTGACAGGAACACAATCCACAAGAACCTATGCATCAACCTTTTCATTGCTGAGCTCATCTTCCTCATCGGAATCGACATGACGGAGCCCAGGATGGCCTGCTCCATAATTGCAGGAATCCTGCATTACTTCTTTCTGGCGTCTTTCGCCTGGATGTGTATGGAGGGGGTTCAGCTCTATCTGATGCTGGTGGAGGTCTTTGAGAGCGAATATTCACGCAGGAGGTATTTCTACATGGCGGGATACCTCCTCCCCGCTGTGGTTGTAGGCGTGTCCGCTGCTGTAGACTATAGGAGCTACGGGACCAAAAAAGCATGCTGGCTCAGGATGGACAATCACTTCATCTGGAGTTTCATTGGACCCGTCACCTTCATTATTATGCTCAATCTCATCTTCCTGCTCATCACGATGTACAAAATGATGAAACACTCTACATCGCTGAAACCTGATTCCAGCCGGCTGGAGCACATCAAGTCGTGGGTCATGGGCGGCTTTGCTCTGCTGTGTCTCTTGGGCCTGACCTGGTCATTTGGTTTGTTCTTCATCAGCGAGTCATCTGTCGTGTTAGCGTACCTCTTCACTATCTTCAACACTTTCCAGGGCATGTTTATCTTCACCTTCCACTGCTTGCTTCAGAAGAAAGTTCGGAGAGAGTACAGCAAATGCCTCCGACACACGTACTGCTGTAGCGGGATCACGACAGAGAGCTCGCACAGCTCCACAAAGACCTCAACAACGCGGACAAGCGCTCGCTATTCCTCTGGTACTCAGAGTCGAATCAGAAGAATGTGGAATGACACAGTAAGAAAACAGTCTGAGTCCTCTTTCATCTCAGGAGACATCAACAGCACATCAACCCTCAACCAAGGAATGACGGGCAATTATCTTCTTACTAACCCTCTTCTGAGACCACAAGGCACTAATAACCCCTACAACACCTTACTGGCTGAAACTATCGTATGTAACACACCAACGGTGCCAGTCTTTCACTCTCCAGGACACTCGGTGACCAGCGGCAGAGATACGAACACGTTCGGTACTCTACCACTCAACGGCAACTTTAATAACAGCTACTCACTTCATAACTACAGCGATGGCGTGCAGGTGGTGGATTGCGGGCTCAGTCTCAATGACACGGCCTTCGAGAAGATGATCATCTCAGAGCTTGTGCACAACAACCTCAGGGCTGCCGAGTCCCAGATTAGCACCAAAAAGGGGGCGGGGATCAGCAGAGGGGAGGAGCCTGTGGTCGCGGAGACATCGTCCCTGGTGCAGGTGGGCGGGGACAGCGAGATGGACGGTCTGGGGTTGCACCACACGCATCCCCGCACGCTCGATGCCCCCCTCATCCCCCAGCGAACTCACTCGCTCCTGTACCACACGCAGGAGAGAGCGAGGGCCGACATGGAAGCTTCGCAACCCCACAGCTACATCGGCCAGCTCCCGCCTCCGGCTGAGACCGCCTTGCCCTCCCCCAACAGAGACTCGGTGTACACCAGCATGCCAAACCTTAGAGACTCGCCATTCTCGGAGAGCAGCCTAGACATTGGCCAGGACCTCTCGCCATCCAAACATAGTCCGAACGAAGACGTTTACTATAAAAGCATGCCCAACCTGGGGTCAGGCCAACAGCTGCACGCGTATTATCAGATGAGCAGAGACAGTAGCGAGGGCCTCATCATCCCCGTCTCTAAAGACGCTTGTGTCCCCGAGGGGGACGTACGAGAGGGACAAATGCAGCTGGTCACAAGCCTT

Function

symbol description
adgrl2a Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and brain development. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in axon and membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in brain; eye; and tail bud. Orthologous to human ADGRL2 (adhesion G protein-coupled receptor L2).
adgrl2 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and brain development. Predicted to act upstream of or within positive regulation of synapse assembly and response to bacterium. Predicted to be located in axon and plasma membrane. Predicted to be integral component of postsynaptic membrane. Predicted to be active in glutamatergic synapse and neuron projection. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04593 ADGRL2, LPHN2; adhesion G protein-coupled receptor L2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_00870909_00930600.mRNA True 4296 mRNA 0.51 20 870909 930600

Neighbor

gene id symbol gene type direction distance location
CI01000058_00847992_00862210 NA coding upstream 8479 847297 ~ 862430 (+)
CI01000058_00728698_00738214 NA coding upstream 131971 728520 ~ 738938 (+)
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 216006 652335 ~ 654903 (+)
CI01000058_00592498_00596709 NA coding upstream 274096 592331 ~ 597171 (+)
CI01000058_00548398_00567030 NWD1 coding upstream 303737 547827 ~ 567172 (+)
CI01000058_01239590_01240099 NA coding downstream 308902 1239502 ~ 1240300 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding downstream 317634 1248234 ~ 1263318 (+)
CI01000058_01266712_01271962 SAMD13 coding downstream 335153 1265753 ~ 1274437 (+)
CI01000058_01280337_01289153 DNASE2B coding downstream 347992 1278592 ~ 1289874 (+)
CI01000058_01298298_01311989 BMP7A coding downstream 367476 1298076 ~ 1313046 (+)
G247683 NA non-coding upstream 63597 806885 ~ 807312 (+)
G247672 NA non-coding upstream 76596 794088 ~ 794313 (+)
G247667 NA non-coding upstream 80413 790279 ~ 790496 (+)
G247663 NA non-coding upstream 85669 785025 ~ 785240 (+)
G247653 NA non-coding upstream 107094 763595 ~ 763815 (+)
G247639 NA non-coding downstream 404 931004 ~ 932179 (+)
G247696 NA non-coding downstream 5615 936215 ~ 936445 (+)
G247705 NA non-coding downstream 36548 967148 ~ 967373 (+)
G247711 NA non-coding downstream 40039 970639 ~ 970871 (+)
G247723 NA non-coding downstream 76125 1006725 ~ 1007170 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 415165 434913 ~ 455744 (+)
G247940 NA other downstream 522397 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 865113 1794468 ~ 1800421 (+)
G250039 NA other downstream 3763808 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3895776 4864571 ~ 4888216 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location