CI01000058_01364846_01374544


Basic Information

Item Value
gene id CI01000058_01364846_01374544
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1364846 ~ 1374584 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01364846_01374544.mRNA
ATGACTGGAGAGGTGTCACATGGGCAGGTACCTCCCGGGGGGTGGGACAGCATGTTCAGTTACAGCTCTTCCCCCTACATACTGCACTTCAAAGTCTTGGAGTCGGACTGGTGGACGTGTTTGGCGTTTTGGTCTGGCTGCCCCAACGATCTCCTCATCAGATTCTATGGTACCAGGAATGAACACTGTCTCCGGCTCGAAGGACCAGTTGTTGGAGAGGAAAGGAGACTGCTAGGCTCTGGTTCTGACTATCAGCAGTACACTCCTAGGGTGTCGAGAGATTTGCAGCTTGTACCTGAGACCTCTACGCCGAACTCGAACACTTCTCGCTGTCTGTTTAGTGATCGAGACACTCAGCAAATTAAACTGGACCGTAGCTATTTAGTGGAGTTCATGCTAAAAGGCAAAGGTGTGGATGAAGACCCAAAGGGTGTCCTGTCTATTGATTCAAGCACAGGAGTCATTAAAGTCCACCGTAAGGTCGACTTTGAGCAATACAGTGTTTTGATGCTGACCTTTCAAGCAAGAAATAAATCCAACTTGGCCATAGACACACAACTAGGCATGGAGGTCAACATACTGGACATCAATGACAACCCGCCAATATTCCAGAGAAAAGTTTATGATGTCACTATAAATGAGGCAGCAAAACAAGGTAGTTTTGTTGTTGGTGTATTAGCAATTGATAAGGATGCAGCGGGAACTCTGAATTCCACCATTGATTACAAAATCATTTCCGTAGCTCCAGCCACTAAAAATACGGAATTCTATATCCAAGACAGTGGTGCAATATCGTTTAAAGGATGCTTTGATTATGAGGTGGCTAATAAATACACTATAATAGTTGAAGCAAAGGATCGTGGAGAAGTTGTAAAGTTGTCAAGCACAGCAACCATAATTCTCAACATTCAGGATGGCAACAACCATATACCAGTTATCACAGGGCAAACGGGTTCAGGGTATGTGGTGGAGGGGATGAAAGGTATCTCCCCTCTCAAAATACACACAACTGATACTGACACCCGTCTCACTCCAGCATGGAGGGTCAGATACTCCATACAAGGGGATAAAGGTGGTCACTTCTCCATTCACACTGATCCAGACACCAATGATGGAATCCTCACAGTGATTAAGCCCCTAGACTTTGAAAAACAAGCAGAACAAAAACTCACCATCTTTGTAGAGAATGAAGAGCCTTATTTCTTTTGTGAGGTGAAGGCTAAACCTGCAGATGGCCTCTGGACCGTCATCACAAATCCATCAAAACCATCCTCTATTAATATTACCATAACAGTGGAAGATGCAAATGATCCTCCATACTTCCCAGATCCAAAAAGGAAAGTAAATATGGAAGAAAATGGTGTTATTGGAGCATTTGTGGACAGAGTGACAGCAGTCGATCCTGACACTGGACGTCCTCACAAACTAGAGTATTCTATTGAACAAGATCCTGCAGATGACCATCCTCCAATGACAAGCACTGCTACAATTCAGATCCACATCGAAGACAAGAACGATAATGTCCCCTTGTTAAAGGAGAACATGGTTTCTGTCTGTCAGTCTGATGAAGTGTCAAGTACAGAGATCACAGCCTATGACCCTGATGGGGATCCATACAGCGGACCATTCAGTTTTGAAGTAATAGGAGATCATAAGGATAAATGGAGCTTTGACCCCAGCCATGGTAACACAGTGCATTTGGTGAAGGATAAAAGTGTTCATGCCAGTCTGTACACACTGATTTTGAAAATCTCTGATAAACAGGGCAGGTTTGTCCTTCAGAATCTCTCTGTTGCCGCATGTGATTGTGCTGTCTCACCAAACTGTCTGCTGCAGCGCAACACACAGCAAACAGTAGGAAGTGGTGTCATAGGAATTACCATCTTTGCCGTGCTGATGATTTTGGCAAGCCTGTTGCTGTCCCTAACTTGCTCTTGTGGGACTGTGAAGTCTCTGGTGGAAGTAGACAATGTCTTAGAAGATGCCCTTCTGCCTTCTAACATTGAGAAACCTGGCACTGATTGTGTGGTCCCGACTATTCTACTGAAGAAAACATCTGTAAGTCAGTCAAAGGAAGCAACTCTTGTCAATAATGGGGTTCAACAGACATCTGACATTCAGCAGGTATCTAGCAATGTTATAGCCACTCAGAGTCTCCCAGTTCAAGTGGATGACCGTTGGTCTAGAGGCAGATCACAGTATTCTAGTGAGAAACAGGCATGGATGCGGAAACAAATCCAGTATCAGAGTGAGAACCACTACCAGGGTTCAACATTTAGCAGGAGGAACTCACAAAGAAGACAGAGTGCCTATTTCATCACCCGATCGACTCTACAAAGCTTGCTTTCTCAGAGGCTGCATTCAATACAGTCCCAGGAAAATGAGTTGCTTGATTACGAGCCTCAACTTTATACCTTTGAGGACAACTCTGAGAACTTTGCAGACCTTGACCCCATAGACCTGCCCAGTAATGAGTTTGATCCTGAGCTTTTCTCTGACCTTGGACCAGCATTTAAGCATCTGGCTTCTATCTGTAACCCAGGGACAATGTCAAAAACAGAAGTGATGAAGAATGGGACTAGATAGTCTAGTGATCAGGGGATGGATTCACAAAACATTTTTAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01364846_01374544.mRNA True 2626 mRNA 0.44 17 1364846 1374584

Neighbor

gene id symbol gene type direction distance location
CI01000058_01348684_01352173 NA coding upstream 12258 1348684 ~ 1352588 (+)
CI01000058_01298298_01311989 BMP7A coding upstream 51800 1298076 ~ 1313046 (+)
CI01000058_01280337_01289153 DNASE2B coding upstream 74972 1278592 ~ 1289874 (+)
CI01000058_01266712_01271962 SAMD13 coding upstream 92794 1265753 ~ 1274437 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding upstream 101528 1248234 ~ 1263318 (+)
CI01000058_01384467_01388274 NA coding downstream 9620 1384204 ~ 1388927 (+)
CI01000058_01391493_01394283 NA coding downstream 16909 1391493 ~ 1394419 (+)
CI01000058_01431719_01434294 CHIA.2 coding downstream 56975 1431559 ~ 1434513 (+)
CI01000058_01496481_01498802 NA coding downstream 120286 1494870 ~ 1499810 (+)
CI01000058_01580247_01591754 NA coding downstream 205079 1579663 ~ 1592253 (+)
G247960 NA non-coding upstream 33986 1303301 ~ 1330860 (+)
G247917 NA non-coding upstream 115942 1221593 ~ 1248904 (+)
G248027 NA non-coding downstream 26404 1400988 ~ 1401268 (+)
G248031 NA non-coding downstream 28800 1403384 ~ 1403656 (+)
G248035 NA non-coding downstream 32072 1406656 ~ 1407006 (+)
G248036 NA non-coding downstream 34518 1409102 ~ 1409884 (+)
G247934 NA non-coding downstream 87699 1462283 ~ 1465887 (+)
CI01000058_00592498_00596709 NA other upstream 767675 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 909102 434913 ~ 455744 (+)
G247940 NA other downstream 78413 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 421129 1794468 ~ 1800421 (+)
G250039 NA other downstream 3319824 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3451792 4864571 ~ 4888216 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location