CI01000058_01391493_01394283


Basic Information

Item Value
gene id CI01000058_01391493_01394283
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1391493 ~ 1394419 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01391493_01394283.mRNA
ATGGGACTGGCATCTATTCATTCTATTTTGGTGAAACGCATGGCAGCAGTAGCCGAAGAAATATTTGACGCTGTCAAAGACAATATAATTGAATATGAGCAGGAGATAGAGCGTCTAAAGCAGGAGAACTGTTGTCTCAAGAGCAGACTGACTCACAATCGAAACGGCGTTTGTGCAGAAACACGCCATGATACTCAGAGAGATGGAGGTCTGCAAGGTCCATTGGGCTCAGAACTCTCAGAAATCCAAGTAAAGATGGAGGTTGCCACTGTGATGTCCCATGAGCCTTTGAGACAAATTTCTACCAATACTTCTCCCATTTCTGAAGGTTTTAAATGGCAGGAACCCTCTCACTGTCTCTCACTTCTGGTGTCGAAGAATGAAAATAGTGGTGGTACAGATACACAGTCATCAATCACAGTTAAGTCAGAGCTGTGTGATAATCAGGCTGATCATTCATACTCTGCAGTGCAAAATGGCAATGATTGTCATGCTGAACTTCCAGCACCTGAACAAGATCCGCCCTCTCTTCAACTTCACATTGAAAGTTCTGATGAGATGTCACAAAAGGCAATTCAAAGCCATCAAAACACATTCATTTGCAAGATTTGCAGAAAAACTTTCAGCACTAAAGGACGTTTGCAGAGACACTCTTTAGTGCACCAGAATGAGACCTCTTTCTGCTGTGGTTCAAGTGGGAGTCGTTTTAAATCGAAATTCCACTTGAAAGAACATGAGAGACTTCATACAGGTGATTACCACTACAGCTGCTAAATCAAATTTTGTCAAATGGCACCTTGAGACTGTTTGCCAGACTTAATTCTTAATCATCATAAAAATAAAAAAAAAAGAATAAATAAATAAATAATATTTAACTCGCTCTGTGTAACCCAACAGTTGGGTTGCTGTA

Function

NR:

description
ZNF112-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01391493_01394283.mRNA True 910 mRNA 0.41 2 1391493 1394419

Neighbor

gene id symbol gene type direction distance location
CI01000058_01384467_01388274 NA coding upstream 2566 1384204 ~ 1388927 (+)
CI01000058_01364846_01374544 NA coding upstream 16909 1364846 ~ 1374584 (+)
CI01000058_01348684_01352173 NA coding upstream 38905 1348684 ~ 1352588 (+)
CI01000058_01298298_01311989 BMP7A coding upstream 78447 1298076 ~ 1313046 (+)
CI01000058_01280337_01289153 DNASE2B coding upstream 101619 1278592 ~ 1289874 (+)
CI01000058_01431719_01434294 CHIA.2 coding downstream 37140 1431559 ~ 1434513 (+)
CI01000058_01496481_01498802 NA coding downstream 100451 1494870 ~ 1499810 (+)
CI01000058_01580247_01591754 NA coding downstream 185244 1579663 ~ 1592253 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 230932 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 346180 1740599 ~ 1784676 (+)
G247960 NA non-coding upstream 60633 1303301 ~ 1330860 (+)
CI01000058_01266712_01271962 SAMD13 non-coding upstream 117056 1265753 ~ 1274437 (+)
G247917 NA non-coding upstream 142589 1221593 ~ 1248904 (+)
G248027 NA non-coding downstream 6569 1400988 ~ 1401268 (+)
G248031 NA non-coding downstream 8965 1403384 ~ 1403656 (+)
G248035 NA non-coding downstream 12237 1406656 ~ 1407006 (+)
G248036 NA non-coding downstream 14683 1409102 ~ 1409884 (+)
G247934 NA non-coding downstream 67864 1462283 ~ 1465887 (+)
CI01000058_00592498_00596709 NA other upstream 794322 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 935749 434913 ~ 455744 (+)
G247940 NA other downstream 58578 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 401294 1794468 ~ 1800421 (+)
G250039 NA other downstream 3299989 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3431957 4864571 ~ 4888216 (+)

Expression


Co-expression Network