CI01000058_01580247_01591754


Basic Information

Item Value
gene id CI01000058_01580247_01591754
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1579663 ~ 1592253 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_01580247_01591754.mRNA
ACATAAAAACAACCGGCGGCAACAGACTTGGCAATACAGATTCAAAGATAGTGTTCTATGCGTGTGTCACATGATAGAATGCTATTCTGAATAATGCAACCTCAGATAAACCTTTTGTAAAAAAAACCCTACAAAAGGTTTATCATAAACCGGCACTAAGTACCAGAAACAGACCTAACATTTTCGGTCAGGACTCAGGAGCTGCTACTGCCACAAAAGGCTTTTTCCTGCCTCCCTTGAAGCACACTGTTTACATGCTTCTTTACTTTTACATCTATTGTCTGTTTGTCACCCAAATATCTCTATTGTCCAGTAACATCTGCTCTTTATGGAATACACTTCCTGTCTGACCTCTGACATTATCTATTACTGGATCTTTTTAGCCTTTACAGGTCAGAAGGCCACAGTAATAACGGCCTACACAGATGGGCAAAACAGTCCAGAGATTTATAGAAGAAAATATGCAAAGTCATCCTACTAAAGCTTGGTTGTGGATGGCTATGGACACACTTATGCTTCAAATGAAACCAAAACTTGCCCTAAAGATGAAAAGAAAAAAAATGGACAAATAAATTAGAAACATTATGAAGACTTCAGGGAAGCTCGTACTATTGCCCTCAGGCGCTGTGATTGTGTGCATGAGGCAACATGAGGTCATAATTCAGGTGCACTTATCCAGAACTTCACTCTGCATGCATCTGGTTCTGGTCTACTTCGCTAACAATATTTACACTAAGCAAACACAGATTCCCCCGTCTATCACCTCCTACTTTGACTTCTCCCCACCCACCTTATGAATAATTAATCACCATGTGGGCAGACCCCTCCCCCCTTTGAAAAAAGATCCACACACACGTGCTCACACTAAAAGGCATACACACGACAAGGAAAAACACAAACACATGACTTATATGTAAAAATCGAGATGGCCGGGTGTGATGCGCCCCCCCCCATCTCCAAGCGGGCCATCGCCTGCTCTCAGCTGGGGGGAATTTAGCATTTCTCAGGCTGGGATGGAAGATTCTCCCCTCCTCCGGGGCTTTCCCTCTGAGCTTGACCTCTCAATCTCGTGTACGTCTGGACCCCTTTTCGCCTGCCCTCATGTCACCTACTGACAAATCAATACGATGTCAACAACATGCAAATGCTCGCTGTATATGATTAGAGATGTCTAATATGGATAGAGATCGATAGATTCCAGTGCCAGCCGGACAGCGAGAGTGAGTGTTGAATGATAAAGATATTTATGGTTCATTAAAAAAAACAAAACAATTAATTCTACCTTCATTTAAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_01580247_01591754.mRNA True 1296 mRNA 0.42 4 1579663 1592253

Neighbor

gene id symbol gene type direction distance location
CI01000058_01496481_01498802 NA coding upstream 79853 1494870 ~ 1499810 (+)
CI01000058_01431719_01434294 CHIA.2 coding upstream 145150 1431559 ~ 1434513 (+)
CI01000058_01391493_01394283 NA coding upstream 185244 1391493 ~ 1394419 (+)
CI01000058_01384467_01388274 NA coding upstream 190736 1384204 ~ 1388927 (+)
CI01000058_01364846_01374544 NA coding upstream 205079 1364846 ~ 1374584 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 33098 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 148346 1740599 ~ 1784676 (+)
CI01000058_01794468_01800421 KISS1 coding downstream 202215 1794468 ~ 1800421 (+)
CI01000058_01838039_01842964 NA coding downstream 245786 1838039 ~ 1843230 (+)
CI01000058_01957358_02009847 ATP2B4 coding downstream 365105 1957358 ~ 2009847 (+)
G247993 NA non-coding upstream 28813 1492179 ~ 1550850 (+)
G248052 NA non-coding upstream 76103 1467637 ~ 1503560 (+)
G247934 NA non-coding upstream 113776 1462283 ~ 1465887 (+)
G248036 NA non-coding upstream 169779 1409102 ~ 1409884 (+)
G248035 NA non-coding upstream 172657 1406656 ~ 1407006 (+)
G248103 NA non-coding downstream 24323 1616576 ~ 1617014 (+)
G248104 NA non-coding downstream 25098 1617351 ~ 1617920 (+)
G248112 NA non-coding downstream 84604 1676857 ~ 1677153 (+)
G247948 NA non-coding downstream 94526 1686779 ~ 1706383 (+)
G247947 NA non-coding downstream 122031 1714284 ~ 1733492 (+)
G247940 NA other upstream 123216 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 291393 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 982492 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 1123919 434913 ~ 455744 (+)
G250039 NA other downstream 3102155 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3234123 4864571 ~ 4888216 (+)

Expression


Co-expression Network