XLOC_010117


Basic Information

Item Value
gene id XLOC_010117
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 37659520 ~ 37660611 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021997
cagtgttaaatgcaaaTGTGTCTGTGAGTGCCATTGACCTATCAGCACTACTTAAAGTATAACCTCTCCTTGTACAACACTGAATATTTCTCTGAGACTTGCAGAACGGTGCCAGAGGAAAGAGCATCCAGGGTGAAAATGGTGTCCAGAAGATTATAAGCGGCAGTCATCTTCAATGCTTTATGAAGCAACAGTCATTCATCGCAATGGGTGAGACTAAAAAACGCAGTTGTGCTTCACAAAATCAACACAAACTGTTTGAAAGGGTATCAAGCATCTGTTCTCATCCAAAAACAGATTTAAGCAAGACGgcaaatttgttttctttgttttgtgcATGGCTTGAGCAAGTCAGACTACTATTGGTATACTGTATGTGGATGAAGACATGAATGCAATTGAACACAACTGACAGACATGAAGCACAATTGATCAGAGATGGTGTATGACAGGCGAGAGGGAAATGCCATTGCTGAAGGAGGAAGAAAAACACACAGAGCGCTCGATTCTTTGTGAAGAGCTCCAGACGGACCGATGGAGAGGCGTATTGATCAAGCCTATTGTCTGCAACCATCTCAGTAGGATCAATCATTTCTTATCCAGGCCACCTGAAAAGAAAATTTTCAGCATTGTGGAGCGTCACAGGTGAGCTCATGATGTGCAGCTAAACTGGGCTGCCCCCTAAAAACAATGAGGGTTTCTAAGACTTTCAGATACCTCAAACTGATGAATATGATTGTCCTCTGGTGAGGGCGtctttttatgtaaattttttttaaaagtacaagCCATGCTGCTGAAAACACCACCAAACCAGAACATGCCTTTCACTAGCTTTGTCTCCATCcacctttttttaatgtgcattttgtaATGTCACATAAAATAATGCTTAATTgaaacaccaagatgtgcatacatttcaAAAAATGTCCATAAAATAACTTTTTGGATAAACTTTTCATCTGATGCAACTATGGAAACTTATGgaaatttactgaataaatttcAGCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021997 True 1015 lncRNA 0.40 2 37659520 37660611

Neighbor

gene id symbol gene type direction distance location
XLOC_010116 NA coding upstream 17657 37633447 ~ 37641863 (+)
XLOC_010115 adgrb1a coding upstream 29270 37470717 ~ 37630250 (+)
XLOC_010114 NA coding upstream 700692 36955088 ~ 36958828 (+)
XLOC_010113 si:ch73-215d9.1 coding upstream 727692 36768674 ~ 36931828 (+)
XLOC_010112 decr1 coding upstream 899364 36748538 ~ 36760156 (+)
XLOC_010118 NA coding downstream 52653 37713264 ~ 37713637 (+)
XLOC_010119 BX294107.1 coding downstream 110872 37771483 ~ 37771600 (+)
XLOC_010120 si:ch211-198c19.1 coding downstream 216168 37876779 ~ 37879306 (+)
XLOC_010121 cep162 coding downstream 231124 37891735 ~ 37944480 (+)
XLOC_010122 CT025591.1 coding downstream 360408 38021019 ~ 38021134 (+)
XLOC_010109 NA non-coding upstream 1045669 36579000 ~ 36613851 (+)
XLOC_010110 NA non-coding upstream 1050546 36606042 ~ 36608974 (+)
XLOC_010108 NA non-coding upstream 1068179 36560692 ~ 36591341 (+)
XLOC_010134 NA non-coding downstream 1071176 38731787 ~ 38733942 (+)
XLOC_010142 NA non-coding downstream 1963513 39624124 ~ 39627370 (+)

Expression


Co-expression Network