CI01000058_02629861_02631891


Basic Information

Item Value
gene id CI01000058_02629861_02631891
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2629690 ~ 2632294 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_02629861_02631891.mRNA
GTATATATGAGCCAGACCTGTTCACAAACTCTCACCCAAACTGGAACAATATCTCATCTGCCAAACAGTGTGAAACCAAACAAGAAGTCTATGTAGAGTGTAAATACAATAGCAGAGCAGGAATCTGGATCCAAAAGGACGTAGTTTATCGTCACTGGCTGTGGAACAGTGATGGGCACACGGCTACAAGGAACTGTTCTGCACCTTTTCTTTTCTATTCCTCCTTTCTACTGTTCCTTTGAAAGACAGTCTTCCAGGAACAGTGTCATTTTTAAGCTTTGCCAACAAGTTGGAACACTTATGAAGATCCTGCGACCGCTGCACTGGAATGCCTGCAGCTGGCCGCTGCACATGTCTGCACAACAGAGGAGGGAAAGACACGCAGCGGAACGCTACATTTCACATCAGAAATGTCTTGAGGGACTTCTGTGTGGTGGATACGCCAGCTTCATGCTTGGTGAGGTCTCCGCTGACCTTGTTTCATCTACAAGCCGCCTTACGATCATTCAGCACAGAGCCGAGCGTATTCCTGCAGGATATCGGATCATGTCAGCTGCTATACAGAAAACCTAGACATTAAGCTTTGATCATTATTTTCAATTACAAGTTATTTACAAGCTGCTCTGTGCTTGCAATAAGATGATCCTAAATGTTCTCTGTGCTTTTTTGCAGACATATTTCATATTCTGCGAACTTCTCTCACTCTCTCAGTAGGCAGAAGCCAATTAAATATTACGCTTTTCTTTAAAAGGAAGAAAGGGAAAGCAAAGTTCACATCATCTAAAGGAATTCCAATTAACACCCTCCCACACAGCAATTAACTGTTAAAATAACTGATGAACAAACTGAAAATCCCTGGGAGTTCAGATGCTGCTTTTCTAATTAATTCCTGAGTCTTCTGCATCTCTTATATAATGAAACGCCATTTGTTTGTTTGACAGCACATCACCGCCTGGACCGGGCCAAATAAGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_02629861_02631891.mRNA True 976 mRNA 0.43 2 2629690 2632294

Neighbor

gene id symbol gene type direction distance location
CI01000058_02592534_02600835 NA coding upstream 27935 2591193 ~ 2601755 (+)
CI01000058_02578534_02589495 NA coding upstream 39149 2578061 ~ 2590541 (+)
CI01000058_02379628_02392648 NA coding upstream 236910 2378584 ~ 2392780 (+)
CI01000058_02348646_02354404 TMEM183A coding upstream 274605 2348615 ~ 2355085 (+)
CI01000058_02227590_02229507 MYOG coding upstream 399669 2227418 ~ 2230021 (+)
CI01000058_02635467_02636768 NA coding downstream 2882 2635176 ~ 2636985 (+)
CI01000058_02650808_02653235 NA coding downstream 18142 2650436 ~ 2653371 (+)
CI01000058_02883775_02884290 NA coding downstream 249870 2882164 ~ 2885704 (+)
CI01000058_02911431_02958568 SRGAP2 coding downstream 279137 2911431 ~ 2958568 (+)
CI01000058_02964886_02978501 IKBKE coding downstream 332592 2964886 ~ 2978895 (+)
G248432 NA non-coding upstream 129373 2500110 ~ 2500317 (+)
G248406 NA non-coding upstream 168142 2460916 ~ 2461548 (+)
G248405 NA non-coding upstream 170293 2459047 ~ 2459397 (+)
G248404 NA non-coding upstream 173105 2455687 ~ 2456585 (+)
G248384 NA non-coding upstream 213209 2416253 ~ 2416481 (+)
G248516 NA non-coding downstream 41081 2673375 ~ 2673662 (+)
G248519 NA non-coding downstream 52981 2685275 ~ 2685634 (+)
G248574 NA non-coding downstream 234928 2867222 ~ 2878788 (+)
G248566 NA non-coding downstream 259057 2891351 ~ 2908197 (+)
G248594 NA non-coding downstream 332199 2964493 ~ 2964823 (+)
CI01000058_01794468_01800421 KISS1 other upstream 831958 1794468 ~ 1800421 (+)
G247940 NA other upstream 1173243 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1341420 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 2032519 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 2173946 434913 ~ 455744 (+)
G250039 NA other downstream 2062114 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2194082 4864571 ~ 4888216 (+)

Expression


Co-expression Network