CI01000058_02635467_02636768


Basic Information

Item Value
gene id CI01000058_02635467_02636768
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2635176 ~ 2636985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_02635467_02636768.mRNA
ACATAAAAACAAGCGTGTGTATGCGAGTCAGTGCATGATCGAGTGAGTCTCGTACGGAGAGTGTGTGAATTACAGAGTGCGGTAAGTTTTCAAAAAACCATATAATCCGGGCAAGTGCATTAATTCAGAACATCTCACATGCTTGCCTTTATGTCTCTCATGTGTGAAAAAATCTTTAACCAAGACGTACGTTTTTGCATTTCTATTAAACACAGCTAGTCATTCAAAGAAACTACAGTACATGAAATCCCTCCCTTGCTCTTTCTCTCCGTGGCCCTGAATGTCATTTACATGAATCGTACTGCTCTTGCCAACCTCGAGTCAGACCCCATTTACGACGCCCTTTATTTCTGCAAAAGACTAGCAGACTTCCTGACCTCCTATCTCATTTCTCTCTGTGGAGCTCCACCCTTCCTGACGGGCGGGCCAACTTCACAGCTCTACTGTATCCAAAAACAACTCTGCCTGAAACCCGATGCCGTACGCCACTAAGGATGCAGACGACATGCAGACTCGGAAATTTTTGGGCTGCTTTGCTCACAGTTAGTGTTCGTACGTAAATCGAGCTTGGCCCCAGCATCCTGAGGGGGCCCCCCATTTTAACAGTACACAGACTCGAGCCCTCAATTAGACTTCTGTGAATACACTTACAGGCCACACTGTTTACCATCATTTCTCAACATTTTAATGGGATCCAGCGCAAATTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_02635467_02636768.mRNA False 709 mRNA 0.45 2 2635176 2636985

Neighbor

gene id symbol gene type direction distance location
CI01000058_02629861_02631891 NA coding upstream 2882 2629690 ~ 2632294 (+)
CI01000058_02592534_02600835 NA coding upstream 33421 2591193 ~ 2601755 (+)
CI01000058_02578534_02589495 NA coding upstream 44635 2578061 ~ 2590541 (+)
CI01000058_02379628_02392648 NA coding upstream 242396 2378584 ~ 2392780 (+)
CI01000058_02348646_02354404 TMEM183A coding upstream 280091 2348615 ~ 2355085 (+)
CI01000058_02650808_02653235 NA coding downstream 13451 2650436 ~ 2653371 (+)
CI01000058_02883775_02884290 NA coding downstream 245179 2882164 ~ 2885704 (+)
CI01000058_02911431_02958568 SRGAP2 coding downstream 274446 2911431 ~ 2958568 (+)
CI01000058_02964886_02978501 IKBKE coding downstream 327901 2964886 ~ 2978895 (+)
CI01000058_02979997_03027744 RASSF5 coding downstream 343012 2979997 ~ 3028144 (+)
G248432 NA non-coding upstream 134859 2500110 ~ 2500317 (+)
G248406 NA non-coding upstream 173628 2460916 ~ 2461548 (+)
G248405 NA non-coding upstream 175779 2459047 ~ 2459397 (+)
G248404 NA non-coding upstream 178591 2455687 ~ 2456585 (+)
G248384 NA non-coding upstream 218695 2416253 ~ 2416481 (+)
G248516 NA non-coding downstream 36390 2673375 ~ 2673662 (+)
G248519 NA non-coding downstream 48290 2685275 ~ 2685634 (+)
G248574 NA non-coding downstream 230237 2867222 ~ 2878788 (+)
G248566 NA non-coding downstream 254366 2891351 ~ 2908197 (+)
G248594 NA non-coding downstream 327508 2964493 ~ 2964823 (+)
CI01000058_01794468_01800421 KISS1 other upstream 837444 1794468 ~ 1800421 (+)
G247940 NA other upstream 1178729 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1346906 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 2038005 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 2179432 434913 ~ 455744 (+)
G250039 NA other downstream 2057423 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2189391 4864571 ~ 4888216 (+)
CI01000058_02227590_02229507 MYOG coding upstream 379741 2227418 ~ 2230021 (+)

Expression


Co-expression Network