XLOC_010118


Basic Information

Item Value
gene id XLOC_010118
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 37713264 ~ 37713637 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021738
ATTTGCTTTAAAGATAATTTTCCTAATTAACCAACACAAGATTTAATTAAATGCCGGTCTGCTTTAATTACAGTGATTCTCGCTCGCACGCTCTCCCTCTCTCCAGCTGAACAAAGCAACACGTCGAGCGTGGAGAGCTGAGGCGTGGAGGGACTGAGCTTTCCGTGAGGCCGAAGCAATATAACCTGATTGATGGGCTAAGCGGACCTGCATGCTGGCTATCATCCTGTTGGGGAAATGAGCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021738 True 244 lncRNA 0.48 2 37713264 37713637

Neighbor

gene id symbol gene type direction distance location
XLOC_010117 NA coding upstream 52653 37659520 ~ 37660611 (+)
XLOC_010116 NA coding upstream 71401 37633447 ~ 37641863 (+)
XLOC_010115 adgrb1a coding upstream 83014 37470717 ~ 37630250 (+)
XLOC_010114 NA coding upstream 754436 36955088 ~ 36958828 (+)
XLOC_010113 si:ch73-215d9.1 coding upstream 781436 36768674 ~ 36931828 (+)
XLOC_010119 BX294107.1 coding downstream 57846 37771483 ~ 37771600 (+)
XLOC_010120 si:ch211-198c19.1 coding downstream 163142 37876779 ~ 37879306 (+)
XLOC_010121 cep162 coding downstream 178098 37891735 ~ 37944480 (+)
XLOC_010122 CT025591.1 coding downstream 307382 38021019 ~ 38021134 (+)
XLOC_010123 pogzb coding downstream 405367 38119004 ~ 38136670 (+)
XLOC_010109 NA non-coding upstream 1099413 36579000 ~ 36613851 (+)
XLOC_010110 NA non-coding upstream 1104290 36606042 ~ 36608974 (+)
XLOC_010134 NA non-coding downstream 1018150 38731787 ~ 38733942 (+)
XLOC_010142 NA non-coding downstream 1910487 39624124 ~ 39627370 (+)
XLOC_010143 NA non-coding downstream 1914076 39627713 ~ 39628196 (+)

Expression


Co-expression Network