XLOC_010120 (si:ch211-198c19.1)


Basic Information

Item Value
gene id XLOC_010120
gene name si:ch211-198c19.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 37876779 ~ 37879306 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020083
ATACTCTGAAAAGACTCTGTATGGACGCAGTTAAACTCCCAAAATATCCTCAGCCTCCTCAAGACGTTCCTCACCCACGTTCTACTGACTCATTCAGACTCTAAACAGCAATGATTAAACACCTCAGCCTTTTGCTAGTCATCCTGGTCCTGGCCATTACAACATTAAACACTGAAGAGGAGCTGAAAAAATCTGGCTTTGGATTTCCACCGCCACGACACGGACTCGCTCTTCTGAAGTGGTACGTGAAAGACTGCATCGACAATAACATGAAGGCTCTCTGTAATCCTGTAACTGGAGAGTTTGGGTTCCACGTGTTTCATAATGAAGGGAACCTGCTCCCTCCATTGAAGGACAAACACACGTATAAATACTTCACTATAGGAAACCTTCACTACCGGCACTCTGAGGATCTCCCCTATGAAGTGAGGAAGTACTATGATCCACATGATCAACGAAGCAACATGGACAGAGTCCTTGTGAAGCTCAACCTGAACAAGAATCAAATTGAAGAGATCTACATATCAGAGCACTATAATCCCCCCAGAACTTTTCGTTTAGGGGTCTCTCTCATCGATGAGCTGAGATCGCATACAAAATATTGAATCTATTGAAACATCTCagtgaagtttaacagagcaaggatttttctCACAGTATTTATGATTCTAATTCTTATTTCTTTTGATTCAattcatttcatctttatttctatagcgctgtTACAATGATTATGTCAAAGTAGCTTCACTTAGAAGATTattgtaaattgaaacagtgtcagtccaggtttcagagttgaagttcagtttggttcagtgtggtttaattttcactgctgaaagtcctaCACTGAAGAGCACATAAATCCAATttaagtttggctggaataaaaaaagtatgtaaagttaaagtcaaaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-218 No description available

Ensembl:

ensembl_id ENSDARG00000089333

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020083 True 920 mRNA 0.40 2 37876779 37879306

Neighbor

gene id symbol gene type direction distance location
XLOC_010119 BX294107.1 coding upstream 105179 37771483 ~ 37771600 (+)
XLOC_010118 NA coding upstream 163142 37713264 ~ 37713637 (+)
XLOC_010117 NA coding upstream 216168 37659520 ~ 37660611 (+)
XLOC_010116 NA coding upstream 234916 37633447 ~ 37641863 (+)
XLOC_010115 adgrb1a coding upstream 246529 37470717 ~ 37630250 (+)
XLOC_010121 cep162 coding downstream 12429 37891735 ~ 37944480 (+)
XLOC_010122 CT025591.1 coding downstream 141713 38021019 ~ 38021134 (+)
XLOC_010123 pogzb coding downstream 239698 38119004 ~ 38136670 (+)
XLOC_010124 selenbp1 coding downstream 258940 38138246 ~ 38157299 (+)
XLOC_010125 pi4kb coding downstream 280452 38159758 ~ 38200523 (+)
XLOC_010114 NA non-coding upstream 917951 36955088 ~ 36958828 (+)
XLOC_010134 NA non-coding downstream 852481 38731787 ~ 38733942 (+)
XLOC_010142 NA non-coding downstream 1744818 39624124 ~ 39627370 (+)
XLOC_010143 NA non-coding downstream 1748407 39627713 ~ 39628196 (+)
XLOC_010144 NA non-coding downstream 1752304 39631610 ~ 39632068 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location