CI01000058_04748480_04757498 (QRICH1)


Basic Information

Item Value
gene id CI01000058_04748480_04757498
gene name QRICH1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4748424 ~ 4757638 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04748480_04757498.mRNA
ATATTTATACCCCTTTTTTGTGTTCCAGGCTCCTGTGCAGGGTGGATTGACCTGTCATGAATGAGCCCATTGAAGGCGGTGCGATCTCGTTCGACGAGTATGTGCGGCAGAAGGCACGCACTATACCTCAGCACCGCATGAAAGAGTTTCTGGAGTCACTGGCCTCCAAAGGCCCAGAGGTGCTGCAGGAGTTCAGTCAGCAGACCAGCGGCACCACCACCACTATGGTGTACCAGCAGGGTGCCAACTGCATCTACACGGACAGCACAGAGGTGGCAGGGTCATTGTTGGAGCTGGCATGTCCGGTACAGGTGACGTCTACACAGATCTCCCCCCAGCTGGCTGCAGCTGTGCATCAAGCATCTGAACAGCAGATCCAAGTACAGGTGCAGATTCAGGGTGAGCAGGGTCAGACAGTTGGCCAGGTACTTCAGGTGGCGTCTCCCACCCAACAGCAGCTACAAGGAGTTACCACAACACAGCTGGTACAACAGGGGGAACTTACAGAGGAACAACAACAACAGATCCAGGCCCAGCTGGTGGCAGCAGTTGCCGGAGGTCAGCAGATTCAGATTCAGACTGTGGAGGCTCTGTCCCCCCCTCAGCAGCAGGGCTCCCCTAGGGAGGCAGAGAGACGACCTGGAGCCTCACCTGCTGTCCTCCAGCCTGCAAAGAAACGCAAGGTGGATGTCCCAACAGTTGTGTCCTACTCGCTTCCTCAAGGGCAGCAGCTGGCTACTGTACTGGCCATCCCACAGGGCCAGCAGCAGGGCTACTTGTCACTTCGACCAGATCTGCTGACCGTTGATAGCACTCATCTCTACAGTGCCACCGGTACCATCACAGGCCCAGCGGGTGAGACCTGGACCATACCCGTGTACTCGGCCCCACAGCAGCAAGGCGTGGCCCACATCGCCATCCCTCAGGAGGCCTATAGCACCGTGCAGGTACAGGCCTCGCCTACCGATAAAGACAAAGACAAGATGGTAATTGGTGCGTCTCAGGCTGCTGGGGCAGTGGCCGTTCCAGTGTCTGGCTCAGGAGTGACCACTCAGGAGGAAGTTGTACATTCGCTGTTCCCAGCACAGTTTATGAATGGAAACATTCACATCCCTGTAGCAGTGCAGACTGTAGGTGGTGCTTACACTGGGACAACGCAAGCCCTTCATATATGGGATCCGCAGCAACAGCAGCAGCACATACAGGATGGGGAGGCTCAGGAACAACAGCTCCACCTGCAGGCGCAGACAGAGGCGGAGCCACAAGTGGAACCTCCTCCTGAGCTGGTCCTCCCAAATACGCTGAAGCCTGAGGAAGGACTGGAGGTGTGGAGGCTTTGGGTTCAGCGCAAAAATGATGAGCTGGACAAGAATGAACAAAATAAGCTGGCACCTATTGGACGTCGACAGCCACTGCGCTTCCAGGATGATCTTGTGTCAAGTTCAGTGGGCGAGTTGAACTTGGCTCTGTCCCTGATGACCCAAGAGGCTCGTGGGCTGGAGGGGGAGCCGTTTGAGCCTGATTCACTATACTATGTATTTTTATGTATACAGAAATACATGTTTGAGAACGGCAGGGTAGACGACATCTTCTCTGATCAGTACTACAGCCGGTTTTGTCAGTGTTTACACAAAATTCTCGAGGAGTGGAGGCCCAGTGTTCACCCTCTTGGCTATATTATCCCAAGTCATGTGACCGAGGAGATGCTATGGGAGTGTAAACAGCTGGGAGCTCATTCTCCATCCACTCTTCTTACTACACTGATGTACTTCAACACCAAGTACTTTCACTTGACCACAGTTGAGCAGCATATGAAAGTGGCCTTCTCCAAAGTGCTCAGACACACTAAGAAGAACCCCACCAACCCTAAAGACAAGAGTACCAGCATCCGCTACCTGAAAGGAGTCGGGCCCCACCATGTTGGACAGAAAGTAACAGATGACATGTACGCGGAACAGGCTGAGGACCCAGAGAACCCGTTGCGCTGTCCTATCAAACTCTATGACTTTTACCTCTTCAAATGCCCTCAGACTGCCAAGGGTCGTAATGACACGTATTACCTGACGCCAGAGCCGGTTGTGGCACCGAACAGCCCTATTTGGTACTCCACTCAGCCAATCACGAGCGAGCAATTGGAGCACATGCTAACACGCATCATGATGGTGCGGGAAATCCAGGAGATAATCTCCATTGCGCAGGCCAATGTACACTGAGACAAGATGAGGGCAAAGAAATCAAGATGGAATAAGAGAGAGCAGCTTTCTCCAGCTCTCCATCTTGCCATCATCATCTCCTTTCTCAAAGAGACTGAATTCAAGTTGCCTCTGCAGCCTCTCCTTATATTCATTCATGA

Function

symbol description
qrich1 Orthologous to human QRICH1 (glutamine rich 1).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04748480_04757498.mRNA True 2353 mRNA 0.53 11 4748424 4757638

Neighbor

gene id symbol gene type direction distance location
CI01000058_04678629_04687645 TMEM110 coding upstream 59929 4678102 ~ 4689520 (+)
CI01000058_04656762_04675421 SFMBT1 coding upstream 72327 4656316 ~ 4676097 (+)
CI01000058_04637318_04650366 PRKCDB, PRKCD, PRKCDA coding upstream 97918 4637218 ~ 4650506 (+)
CI01000058_04584028_04613429 FGD5A coding upstream 134677 4584028 ~ 4613747 (+)
CI01000058_04556260_04565696 FGD5A coding upstream 182416 4556157 ~ 4566008 (+)
CI01000058_04769469_04774262 TWF2B, TWF2 coding downstream 11831 4769469 ~ 4774485 (+)
CI01000058_04777182_04780095 NA coding downstream 18904 4776542 ~ 4780376 (+)
CI01000058_04782847_04791049 UBA3 coding downstream 25209 4782847 ~ 4791555 (+)
CI01000058_04792565_04803181 TMF1 coding downstream 34927 4792565 ~ 4803404 (+)
CI01000058_04806751_04821030 NA coding downstream 49113 4806751 ~ 4821695 (+)
G250075 NA non-coding upstream 9979 4727809 ~ 4738445 (+)
G250049 NA non-coding upstream 71273 4676913 ~ 4677151 (+)
G250035 NA non-coding upstream 206181 4541999 ~ 4542243 (+)
G250013 NA non-coding upstream 295853 4451527 ~ 4452571 (+)
G250098 NA non-coding downstream 126367 4884005 ~ 4884279 (+)
G250095 NA non-coding downstream 126824 4884462 ~ 4885100 (+)
G250120 NA non-coding downstream 147302 4904940 ~ 4905140 (+)
G250124 NA non-coding downstream 160734 4918372 ~ 4918573 (+)
G250187 NA non-coding downstream 327002 5084640 ~ 5137852 (+)
G250039 NA other upstream 51263 4694408 ~ 4697161 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2950692 1794468 ~ 1800421 (+)
G247940 NA other upstream 3291977 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3460154 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 4151253 592331 ~ 597171 (+)
CI01000058_04864571_04888198 NA other downstream 68738 4864571 ~ 4888216 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location