XLOC_010123 (pogzb)


Basic Information

Item Value
gene id XLOC_010123
gene name pogzb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 38119004 ~ 38136670 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020087
ATTCAAAACAGGAAGTGGCGTTTTGAGCGTATCAACCAATCGCAGCAGGAGAAAAAACAGAACCTCTGCCCATTTAGCGCATTTATTCGTCTCGTCTGTGACGTACCGGCAGGCTTTGTGTTCTTTCAATATATCACGTTGAATATATTTCTATATAGACTATAATCTgGATGAAGGGATTTTGTAAACGCCAGTCTTGACGTTAAAACTGGTCGGACCCGATTCCTGTCAGAAGaaacatgGATTCGGATTTGTTTATGGAGtgtgaggaggaggagctggagccATGGCAACAGCAGTCTATGGATGAACCAGCCGGAAATGCTGAAAGCAGTACTCCCTCCGTCACTTCCACTCCAGCCCCGGTGGTTGATGTTCCAGCTCCGCCTAAGACCATGGTGATCCCAAGCCTAACGTCTGTAGTAAATGCGGCGAACACGGTTCCGCTGATCACAAATACAAtaaCTCAACGTGCGGTTGTGCCGACTGAGATCCCTAAAGCAGTGCAAGGGCAGCCGGTCATCTTGGCACCAGGAGGAGGTGGACTGGGCACTGTGGCTCTGTCACAGGTTCTCCTGCCTGGAACATCTATTGCCAATGTTACCAACAGTCAGCCGATCTACTTTACCACACAGGGTCTTCCTGTCCAGAATATCCAGCCTGGCCAGGGTCCAATGAGTTTAGTGCTGAATGTCCAACAAGGCCAAACTGTTCGACCGATTACTCTACTCCAGGCACCTGGCACACAAATTTTCAAACCAGCCATCGGAGCAACCCAAATAATTACCCAGCCTGCTCAAATAAGGGCTGGAGCTCCGGTTGTAAACAGAGCCCAAACGCCTAGTACTTTCAGCACAGTGCAGATCCCTGCTACTCTCACTTTTCGAACCACAAACGCGGTCACCCCAACAGCTGCCAGTTCTCTACCCATCGTATCTTCTACAACCATTACTCAGCCTACCAGGACCACTACTAAAATAGtgaCAATAAAGCAAGGAAATGGACCCCTAGACATGCAAAACCTAATGAATCTTGTGAAGTCTGTGAACCTTCCTGGTGGGGCTCAGGCGCAGACATTTGTAGTCATGAGCAATCAAAATACCAAAAATGGTCCTGTTGTTTCTTCTGCTGTTCCTATCATCTCACAAAATGTCATCCAAACGATCCCACTTCCAAATGCAACCTCATCAACAACCACCACTCATTTGTGTCCTCGTTGTGGAGCTCAGTTCAGAATGATTGAGGCTCTACGCGGTCATATGTGTTTTTGCTGCCCTGATCTGGTCCACATGACTGAAACAAGCAGTACCCCAACAGCTGTGAAACCCCCAGCAACACCACCTAAGAGTGCCTCTGTTGTGCCTAGTGCCAAGGTGGATAGCCCACCTAGCAAAACAGGAGATAGCCATCCCAGACTCGTCATGCTGGTTGATGATTTCTACTACGGCACATTTGAGGGAAATCGAGTCTATGTACCAATGGACAACTCAAAAGAACCATTATCATTCAGATGCCTGACCTGTAGCAAGAAACTAAAGAATAATATTAGACTTATGAACCATATGAGGTACCATGTTGAACTGGATCAACAAAATGGGGAAATGGACAACCACACATCCTGTCAGCATTGTTTCCGTCGCTTTCCTACACCGTTTCGTCTGCAGTGCCACCTTGAGAGTGTCCATACCTCCATTGAATCATCTACCAAGTGTAAGATATGTGAGTGGTCCTTTGAGAATGAGCCAGTGTTCCTGCAGCACATGAAGAACTCCCACAAACCCGGAGAGATGCCTTATGTATGCCAGGTGTGTGAATACCGTTCCTCCTTCTACTCTGATGTGTTTAACCACTTTCGTACCTGGCATGAGGATACCCGCCACCTTCTGTGCCAGTATTGCCTGAAGGTTTTCAAGCATTCCACCAGTTACCAGCAACATTATGTTCGTCATCAGAAATCAACAGTTTACCATTGTAACAAATGCCGTCTTCAGTTCCTTTTCACAAAGGACAAAGTTGAGCATAAAATAAATCACCACAGGACTTTCCGAAAGCCCCGTGAATTGGATGGACTGCAGCCTGGAACAAAAGTGACCATTAGGGCATATGTTGGGAAAAAAACACCAGGTCAGTCAGCTTCAAAAGCATCCACTAATATTCAGAAGAATAGTATTAGCAGTTCACAATCGACAACTCTAAGTGGCGACCAGCAATCAGAACAACAGCAATCTGGGAAGAAACAGGTCAGCAAGATGTTTCAGTTCCTGTCCAAGTTCCAGGAGCAGAGGGCTCAACTGGGCAGACATAAGTGTGTGGAGTGCACTTTTGACATTCCAGACTTTGTGAATCACTACCCCACTTATGTTCACTGTTCACTCTGCTTCTATAGCACGTGCTGTTCTCGTGCTTATGCAAATCACATGATCAAcaATCATGTTCCTGGAAGGGCTCCAAAACCTTCTAAAAAGGGGCCTCCAAGCGTTGTGAAGCTGACTTGTGCAGGTTGTGAATACTCCACTCCTCACGGAAATTTGATGGCCAAACATCTCATCAAGTTCCCTGATCACTCCTACTGTTTATTCATGCGCAAAGAGTGTTTGGAGACAGATATTGAGTTCTGCCATGTTGAGGAGGAGGTGGAGGGTCCACAAGGGGATGAAGCTAGTGATGTTGGGACACAGCCTGACTGGTTGTCCCTGAAACAGTGGAATGTGCCCAAAGAGGAAGGAACAGTGCCAGAGTTCATGGAACGTTGTGGCCCACGGCATATAATGACCAGGAATCATGATGTCCTCGACTACTTCCAGGTTCTGTTTCCTGATGCCCTCTTTGAGCTGATTGTTTGTGAGACCAACGCCTATGCCACTTATTGCTGCTCTTCAGGGCAGGGGGACACATCTTGGCACCCTGTGTCTGTACAGGAAATCAAAGGCTTTTTTGGTCTCTCTATCCTCATGGGGCTTCAAAACCTGGTGGAACCGGACTCGTACTGGACCTGGGAACAACACCAAGGCCGCTATGGCTCTAGAACATGGGAGCTGGTTTACAGGACCATGTCAGTGAATCGTTTTAAGCAGATCAGCACTTACATCCGAATGAGCAGCATGCTTGTGGAGAATGACAGCCAGAGTGCTGACAAGTTGTCATTTTTTCAGCCGATGCTGAGCATCCTGGAGAAAAGCATGCAAGAGGCCTACAGTCCAAACAAGTGCTTGACAATTGATCAAGCTTTCCTACCGAGCCATGATAAGGGAACGGCTCAGGAGAAGAGTAAAAATTCTCAGCCAAGGATATGGCTACTGTGTGACTCAAAGTCAGGCTTTTGCCATAAATTGCTGGTCTCAACACGACAGGAGAAGCACAAAGACTTGGGAAAATCAGTTGTGCCACATCTCACAGAGGGTCTTGAGGGTAAACATCACAACATCTTCTTGTCCAGCTCACTTGCCTCTGTGCAACTCATGAAGGATCTCTTTGATAGTGGTATATACTGCTCCAGCTCTGTCCTGCCACAAAGTGCAGTTTTGCCCAAGGAGTTTTGGGATGAACCTCCACTGGAAAATCCAGGCAATTTTAAACAGTATGAGTTCCCCCCACTTCTTGCCACTAGATGGAAAGATACCAAAGAATTGGTATGCCTCTCCACAAATGCCAACGCAGGCCATGAAGATGTGGTGTGGAGGAGGTCTCCCACTAAAATGGGTGAGCTTTATACTATTGAAAGGCCACAGGCCTTCAAGCTGCTCCAAGACAACATGAGAGGAGTCGATATCTGTAATCAGCTGCTGACGTGCAACCAACTTGGTGGGCTAGATCTTGACACCAACTGGCGGCGTCTCTTCTGGTTCTTTGTCAACTTGAGCATCATCAACTCTTTTATTGTCTTACGAGAGACCCGCAAAGACAACCCACCAGTGTGGCTCCCAGGGGGTCACTTTTCCCAGGCCGTTTTCCGTAAACGTCTGGGCTACCAGCTTGCCAAGTGTGCTGAAAGACACACTCTCCAGAACCAAATCCACAATAGCATGATTGAGCAACAGACTGTGAAAAAAGAAAGTCAAGAGGTGCAAGAAGAGGTCAGACATCGATTAGGCAAAATTACCAGAAGGGCGAGGAGATGTAAAGTTTGCAACTTGAAAAACATGCGTCATGAGAGCATGTATGGCTGCACCGCCTGCCATGCGAATCTGTGCAAGCGTTCTCGCTGCTTCTGGGAGTTCCATGGTTTCCCAACTAATTATCAAGgTAGTGCAAAAGTTGGATTCGTTGACTCTAAGAGGGACGGCACAGAGCCAGGACttaaacataaaacagaaatgttGGAAAGAGGCCAGGCCAAATCCTCAGTGGACATCAGTAATGTTTCACAGGGTGCCACTGCTGGCCAGGACGAAGACgtggaccaagaaatggctcctCTGGAAGACGAAGACACAGAAACAGACACTGATACGGTTGAAAGCAGCGAGGAAGTCCCACTTCGAACAGTGGCTAGTGAGAAAGAAAAGCGATCACTAACCAAACCAACACAGCCTGTGAGAAACAGAGAGGAGTCTTTGACTATTCACCAGCGGCGAATACTTCTTCTTGCACTATGTGCCGGGATCCAAAAAGCAGCAAAAGAGATGGACACCAAACCGCAGCTCATCAAGACCTGGATTCAAGACAAGGAGGATCAGTTAAATGAATGCTGCAGCAGTATCTGTGGAGAGGCTGTTGATCGTCTAGTACAGTGGGTTCTGACACAACGAGAACAGCAGCGTCCTATCAATGAGGCGAGATTGTTTGAAAAAGCTTCAGAGCTCCAAAGCCAGACCAATGAAACAAGTTCATTCCGTATTTCATACGAGTGGGCTGTGAACTTCATGATGCAGCACAAACTGGGCTTGGATACCTGTTTCACAGTACAAAGGGAACTCCCTAGTGCCATGGAAGAGAACTGTCGTTGCTTCAAAGAATTGGTGCATGGTCAAGTTAAGACCAACAACGTTCCACAGTGTGTCATTGGGGTTATGGACCAGCTTTCCGTGTTTGTGGACATCAATATGTTGAATGAGAAAAACAAGGTAAGACGAGACACAGCTATTCAGTTTACCGGGTCTGGGAAGCCTTTCGTAAAGATTTACCTTGCAATGCTTGCAAATGGTACGATGCTTCCTGCAGCACTCTTCACCAGTCACACTACGAGCACACTGAGCAGCACACCAGACACAGTCTTGATTATGGCCAAAGAGGAAGGTTACAAGGCAACAGAAGAGCTAGAAATTTGGGCCACCAAAGTGTGGAAGCAGCATCTCGACTCGCAGAATGAGAAGGAAGCGCTGCTGGTTTTGGATAGCCATCATTGCCTGACGTCTGAGTCCATTATTTCTACAGTCAGTAGCACCAAAACCTTCCTTCCAACCATTCCGGCAGGTTGTACATGCCGACATCAACCTTTAGAGATGTGCGTACGCCCTGTGCTCCAAAGGTTGTTTTTATCTCGTTGGGCACAACAGCCTAAAGAATCAGTTCAGCCTGAAGACCTGATGCAGCTTCTAGTATCCTGGTTAGACAAGGCCATGTCATGCTTCTCAAGTAGGCCTGAATTTATTCAACATTCATTCTGCTTGGCTCATCTGCTTCCGGATCAGGAGACACATACAGATTTGCCTGGTACTTCTGTGGAGTTGCTAAATATACTTTCAGAAGCAACACTGGGACCAGAAGTAGTAGATCTGGAGTCagcagatgaagaagagccaatGGACACACATTCTGTAGACAACGTAACTGAGAAAATAGATCTTACAGAGGAGCAAGAGGATACGGAAAATGAACTAAACGATGACAAAGCGAAAAACACAGAACAGCAAAAGGAAACAAATGATGAATGTTTGGAAATCGCAAGCGAGTCCACCGATTTCTCACATTCGTCGCCTGAGCATGAGACCCCTTCACACAACTCTGAACCAGATCATTTGTCGGAATCTGGTCTGGATGCTAACACTGATCAAACGGATTCAGCAAACAGGTGATATTTGATCTACTAACAGACGCTGGTAGATTTAACAGAAGGACAGGCCTTGCTGAATGTGACTGGTTATTTAATTTACAGCCTATTATTTGGTGGTGTGAAAatggggaggaaaaaaaaagttttttaatcttaaaaactGTATAGATTTATAGGATAGACGTTGCATGATTGGGTTTTGCTAAGTTTTTCTACCTACTTTTATTTCTGTTGTTTATTCACTAGCATACAGTAATACAAAAGCTCCCTTTTTTTGTCTGTTGACAGACAATATTTACTTATATTCCCCATCCTCTGAAAGTTCATCACAGGTTTTTGCCTGTTTATGTTTTAGTTATTTCGAAGATGTAATGGGAGAAATTTGTTTGATAAGCCAGCTGCGACCTGTATTGAGTGATTTGACTCAAGCGTGTGGGTATTGGGTGGATGaaagtattgtttgtttattttttgttgttgttgtcctgCCCCTCTCTTACAGTTTATGTGTGTCCAACGCAGGATGAGTATCAAAAATCATGCGATTTAAAATCTGATAACATTTGAATTGAAGAACGATACAAATGCTGTTTTGAATAatgctatttaaaattatttattcaatgaTTGACCGTAAATTATAGCCTATTATTCCATAGCTTTACAGATTCTGTTTGACATCCAACCTTATTGCATTTTATGACACATGCTACAGTTCAGCCTGTAAGATTGGTTGACAGACTATCTTGCAGCACTTCCATTTTGGTTATTTATGTAGTTATCATATACGTTTACCATTGAGAGAGCATTGATATTGAATGGAGTGTGATCAGTGAGTATACATTCAGTACTGATTTCAGCATCTGAATTTACTGTAGCGACCACATGATGGTGTAACTACACTCCAGGTGTCATCTATTGACATTCAATTCAAAGAGGTATTGATGCACTTTATTAGTGCTCTTCTATGTTTGTAAAGGTGTGTACTTTGATTTCATCTCTGTTTGCTGCAGCAATTTTGTGTATAATTTACATGTTGTGGGACTTCTTGTACAGTCTGATTGCGAAGGTAAGTGGACGTTTATAGAAATGAGGGTCTTTTGAATGTGCTGTTTTGTTTAAACTGCAAAGAGGACTAATGAATAATTGATCATTGAAAAAAGGCGTTGCATATGTGACttcccatttattattattatttttttaatttcttgtgaataaaatttaataaacagtgTGTGCATAAAGCCTTTTTTCTCACAcgtttatgtttt

Function

symbol description
pogzb Predicted to enable metal ion binding activity. Human ortholog(s) of this gene implicated in White-Sutton syndrome. Orthologous to human POGZ (pogo transposable element derived with ZNF domain).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100609-3 Predicted to enable metal ion binding activity. Human ortholog(s) of this gene implicated in White-Sutton syndrome. Orthologous to human POGZ (pogo transposable element derived with ZNF domain).

Ensembl:

ensembl_id ENSDARG00000076542

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020087 True 7266 mRNA 0.45 21 38119004 38136670

Neighbor

gene id symbol gene type direction distance location
XLOC_010122 CT025591.1 coding upstream 97870 38021019 ~ 38021134 (+)
XLOC_010121 cep162 coding upstream 174524 37891735 ~ 37944480 (+)
XLOC_010120 si:ch211-198c19.1 coding upstream 239698 37876779 ~ 37879306 (+)
XLOC_010119 BX294107.1 coding upstream 347404 37771483 ~ 37771600 (+)
XLOC_010118 NA coding upstream 405367 37713264 ~ 37713637 (+)
XLOC_010124 selenbp1 coding downstream 1576 38138246 ~ 38157299 (+)
XLOC_010125 pi4kb coding downstream 23088 38159758 ~ 38200523 (+)
XLOC_010126 myo1eb coding downstream 65170 38201840 ~ 38238909 (+)
XLOC_010127 prune coding downstream 103357 38240027 ~ 38266885 (+)
XLOC_010128 bnipl coding downstream 140669 38277339 ~ 38299644 (+)
XLOC_010117 NA non-coding upstream 458393 37659520 ~ 37660611 (+)
XLOC_010116 NA non-coding upstream 477141 37633447 ~ 37641863 (+)
XLOC_010134 NA non-coding downstream 595117 38731787 ~ 38733942 (+)
XLOC_010142 NA non-coding downstream 1487454 39624124 ~ 39627370 (+)
XLOC_010143 NA non-coding downstream 1491043 39627713 ~ 39628196 (+)
XLOC_010144 NA non-coding downstream 1494940 39631610 ~ 39632068 (+)
XLOC_010145 NA non-coding downstream 1720515 39857185 ~ 39901940 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_02337039_02343109 POGZB coding CI01000016 null 2337039 ~ 2343109 (+)
bowfin (Amia calva) AMCG00012447 NA coding CM030138.1 CM030138.1 18329924 ~ 18350901 (+)