CI01000058_04777182_04780095


Basic Information

Item Value
gene id CI01000058_04777182_04780095
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4776542 ~ 4780376 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04777182_04780095.mRNA
CTATAAAAGAAAACAATTCAATATTTTGAGAAACAATCCGTTATCTCAATCCCTAAAAGCTGTTTGTAAATTCTGTTGCTCTCATTTACAGAGAAAGCCACATGTACTCTTTTTCTAAATGTCACCTTATCCAGTCTTCTCAGAAATGAGTGTTTAAATATGTTGACTTAACCACTGATGTCATAATTATTTATCATATACTTGTTAAGAAAGGACAGATTTTGACTCATTGAGTCAGATGTTGAAACAGAAATAAAAACATTATCATTCCTATAACATATCGATCTGATTTACTGATTGTGACTTGTTGTCTTGTAAGATCTGTTGTTTACCCTGCTGCTTTCCACTGAAATTCTTGCCACATGGTGTAAATAGCATTTGAGTGCATTCTCTTGTTCTTGGCAAACTGTACTTCCTTTGTTTGTTCATACTTTGAGTTCAGTTGAAATTATAAATGACAAAAGACTGATATAGAAAGAACAGCACAACACTTTTTAACCTTTGAACTTTTAGCTCTGCTATCTCCTCTCATGTCATTTTGACATGTAGAAAAATATTTGTTGATTACATATCAAGATGTGTTTTTTATTCCATATGAAGAAACCTTCAGGAATGGTTGCAAGGGGTACAGGTGCTCAAAATGAGAGGGACGGATCAGAAGTTCAACAAATCCAGCAGTCCCAAGCAGCTCCCTACTCTTGGGCCCCAGCTGAGGACTTGCGTTTCATCACCACCACCTTTCAGCACCTACACACCTCAGACCAAGAGAGGCCCAACTAATGTCCGCGTAGAATACGACAGTGGTCGATTCCGTCTTGATTCCAGTTTTCCAGCCCGATCTTGCCTGTTGTCCTTTTCTGCTCTTCCTAGTCTTGTGCAGCACTACGCATCCACGAGTCAAGAGGAGGAGAGGAAAGCAGAAGAACGTCACATGGTGTCAAAGGACAATGGCGTCCTGCTGAAGCTCAGGAAGCCTCTCCACAGACCTCAGGCCTTTCCAACATTACAGCACCTTACACGCCTCGTTATAAACAGACACACTGATTCCCATAAACAGCTGCCGTTGCCGCGGCCATTGTTGATTTACTTGCAAGAATACCCCTTTCAGGTTTGAGGACACTTGGGGAGGACACTGGTGCATTTTAGGGGGTCGTTTTTGCAAAGGTGATTTAGCCATGAAGTCGCAAATCTTGGATTGTGGGTCCTCTTATTATTGTCATATGAAGAGATGTGCATTTGTGCAAATTAACAAGGACTACTTTGTGTAGATTTTTAAAAAAATATTTGTAAATATTTCTCTTTTTAGTAAATCAAAATGTTTCTATATCTTTATGTGCTTCCAAGTATTCATGGAGCTCCAACTCTACATACTACCATCACCAGAACATTGAAAAA

Function

NR:

description
cytokine-inducible SH2-containing protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04777182_04780095.mRNA True 1395 mRNA 0.39 2 4776542 4780376

Neighbor

gene id symbol gene type direction distance location
CI01000058_04769469_04774262 TWF2B, TWF2 coding upstream 2057 4769469 ~ 4774485 (+)
CI01000058_04748480_04757498 QRICH1 coding upstream 18904 4748424 ~ 4757638 (+)
CI01000058_04678629_04687645 TMEM110 coding upstream 88047 4678102 ~ 4689520 (+)
CI01000058_04656762_04675421 SFMBT1 coding upstream 100445 4656316 ~ 4676097 (+)
CI01000058_04637318_04650366 PRKCDB, PRKCD, PRKCDA coding upstream 126036 4637218 ~ 4650506 (+)
CI01000058_04782847_04791049 UBA3 coding downstream 2471 4782847 ~ 4791555 (+)
CI01000058_04792565_04803181 TMF1 coding downstream 12189 4792565 ~ 4803404 (+)
CI01000058_04806751_04821030 NA coding downstream 26375 4806751 ~ 4821695 (+)
CI01000058_04864571_04888198 NA coding downstream 84195 4864571 ~ 4888216 (+)
CI01000058_04923557_04926609 NA coding downstream 142914 4923290 ~ 4927654 (+)
G250075 NA non-coding upstream 38097 4727809 ~ 4738445 (+)
G250049 NA non-coding upstream 99391 4676913 ~ 4677151 (+)
G250035 NA non-coding upstream 234299 4541999 ~ 4542243 (+)
G250013 NA non-coding upstream 323971 4451527 ~ 4452571 (+)
G250098 NA non-coding downstream 103629 4884005 ~ 4884279 (+)
G250095 NA non-coding downstream 104086 4884462 ~ 4885100 (+)
G250120 NA non-coding downstream 124564 4904940 ~ 4905140 (+)
G250124 NA non-coding downstream 137996 4918372 ~ 4918573 (+)
G250187 NA non-coding downstream 304264 5084640 ~ 5137852 (+)
G250039 NA other upstream 79381 4694408 ~ 4697161 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2978810 1794468 ~ 1800421 (+)
G247940 NA other upstream 3320095 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 3488272 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 4179371 592331 ~ 597171 (+)

Expression


Co-expression Network