G247192


Basic Information

Item Value
gene id G247192
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 142755 ~ 143591 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280553
ATAATTGAATAATTGTTAATGAAAAATATAAGTAAAATATTTTGGGTTTAAAACAACTTAATTGAATGCAGTTATGATTTCCAAGAGTAGGATGAATTCAGGCTGATAGGGACACTTTTTCCCCAGTCATTTCAATGGCAAAAACGGTCCTAATCGTTTGATTTTGTAAACTATCCAATACACACAATAGTCAAATATATCTCAAACTGGCTTCCAAAGTGCAAAACTGCTACAAATTAAGTGCAAGAACACAATGTATGCAACATAAATGAAATACTCAGGAGTAGTCAAAAATGTAGGTTAAACTCATAGCACATGCAGTGATGGAGCGTGCAGCATTTACTTTGAACAGAACCGCTCTGAGATGCCAATCATAAGCTGCTCGCGTGAACAGTGCACTTTACTTGGAGTCCCACCACAACCAGCCTTTGCCATGTGATAAGTACACTACTACATCGTGATTTTATTTTCTGTTCGATTAGTGATCATGTGTTTTCTCCGATCGGATAACTATCTGATCGTGAAAAGACCTGGGGTCGTATGTTTAAAGCTTCTAAGAGTAAAATTTTAGTCTTGTGTCAAAATTCTAAGAATGACATAATTTTACTATTATTCCTAGACTTAAGAATAAGTATGATTCATAAAGGTTCCTAAGTGTCAAGACTAGGTCTTGGCTCCTAAATTATTTAGGAGAGCTGGAGAGGTCTCCTGACCTAGTTAGGAGTAACAAGATGGCAGCAAAGAAGAGGAGACACACGCTTTCCAATGAAGATATGATGTATTGGAGTTATATGATGACATGGAGTTGATAAAACGATATAAACTTGTAAATGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280553 True 837 lncRNA 0.36 1 142755 143591

Neighbor

gene id symbol gene type direction distance location
CI01000058_00104333_00105839 NA coding upstream 36031 104333 ~ 106724 (+)
CI01000058_00043409_00059894 NA coding upstream 82333 43409 ~ 60422 (+)
CI01000058_00021632_00039608 NA coding upstream 102785 21480 ~ 39970 (+)
CI01000058_00241253_00245763 NA coding downstream 97662 241253 ~ 246107 (+)
CI01000058_00313907_00314170 NA coding downstream 170166 313757 ~ 314670 (+)
CI01000058_00333202_00355871 PANK4 coding downstream 189449 333040 ~ 355875 (+)
CI01000058_00382692_00395743 NA coding downstream 239101 382692 ~ 395774 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 291322 434913 ~ 455744 (+)
G247176 NA non-coding upstream 80629 61870 ~ 62126 (+)
G247165 NA non-coding upstream 88117 54196 ~ 54638 (+)
G247163 NA non-coding upstream 89653 52884 ~ 53102 (+)
G247162 NA non-coding upstream 90077 52383 ~ 52678 (+)
G247160 NA non-coding upstream 90827 51547 ~ 51928 (+)
G247257 NA non-coding downstream 84306 227897 ~ 228534 (+)
G247300 NA non-coding downstream 172388 315979 ~ 316343 (+)
G247309 NA non-coding downstream 188671 332262 ~ 332527 (+)
G247314 NA non-coding downstream 277539 421130 ~ 421530 (+)
G247293 NA non-coding downstream 282167 425758 ~ 426095 (+)
CI01000058_00592498_00596709 NA other downstream 448740 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 1085018 1278592 ~ 1289874 (+)
G247940 NA other downstream 1309406 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1652122 1794468 ~ 1800421 (+)

Expression


Co-expression Network