G247300


Basic Information

Item Value
gene id G247300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 315979 ~ 316343 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280679
CTTAACCTTTTCACTGGCATTTTGTTTTCATAGTTAGACATATCATGATGTATCATTATATAGGATTGTCTAGCAATATATCGATTATCGCAGAATCGCTGTATCGTGATATTGTTATTGTGAGCCATGTATCGTGATCGTATCTTAAGGCAGTGGTTCCCAAACCTGTCCTGGAGGACCACTGTCGTAAGGGACCCTGTGATTCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280679 True 209 lncRNA 0.41 2 315979 316343

Neighbor

gene id symbol gene type direction distance location
CI01000058_00313907_00314170 NA coding upstream 1309 313757 ~ 314670 (+)
CI01000058_00241253_00245763 NA coding upstream 69872 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 209255 104333 ~ 106724 (+)
CI01000058_00043409_00059894 NA coding upstream 255557 43409 ~ 60422 (+)
CI01000058_00021632_00039608 NA coding upstream 276009 21480 ~ 39970 (+)
CI01000058_00333202_00355871 PANK4 coding downstream 16697 333040 ~ 355875 (+)
CI01000058_00382692_00395743 NA coding downstream 66349 382692 ~ 395774 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 118570 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 150290 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 200807 517150 ~ 528807 (+)
G247257 NA non-coding upstream 87445 227897 ~ 228534 (+)
G247192 NA non-coding upstream 172388 142755 ~ 143591 (+)
G247176 NA non-coding upstream 253853 61870 ~ 62126 (+)
G247165 NA non-coding upstream 261341 54196 ~ 54638 (+)
G247163 NA non-coding upstream 262877 52884 ~ 53102 (+)
G247309 NA non-coding downstream 15919 332262 ~ 332527 (+)
G247314 NA non-coding downstream 104787 421130 ~ 421530 (+)
G247293 NA non-coding downstream 109415 425758 ~ 426095 (+)
G247316 NA non-coding downstream 110904 427247 ~ 427462 (+)
G247317 NA non-coding downstream 112101 428444 ~ 433463 (+)
CI01000058_00592498_00596709 NA other downstream 275988 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 912266 1278592 ~ 1289874 (+)
G247940 NA other downstream 1136654 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1479370 1794468 ~ 1800421 (+)

Expression


Co-expression Network