G247314


Basic Information

Item Value
gene id G247314
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 421130 ~ 421530 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280693
CCAAAATCATGGATCTTTCTCATCTTATTTGCAAATGCTTAAACATAGCATGTCAGAAATGAAGACAATGTTCCACTCTTTAAATATAGTACAAAACCTCTTTTACAACAACAGCAGCATAAAAGTATTAAAAAAAATATATCAAACAAATACTAAAACAATTGATAAGCATTTTTAAGTAGCAGATCACTGAAATATTGAGAAATAGCAGATTCCAATCTCAGTTGGAGGAATAGTCAGGTGTTGAAGTTCTTTTCATTACATGGACACACAGTAAAATAGGACTATTTGAATTGGTTTTGTTCAGTGTGGATGCAGAACAACACAGAGAGAAGAGACACAGACAGCAGAGAAAAAAAATAATGCCTGGGTAAGGCAGAGGAATAGTTGTTGGAGGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280693 True 401 lncRNA 0.34 1 421130 421530

Neighbor

gene id symbol gene type direction distance location
CI01000058_00382692_00395743 NA coding upstream 25356 382692 ~ 395774 (+)
CI01000058_00333202_00355871 PANK4 coding upstream 65255 333040 ~ 355875 (+)
CI01000058_00313907_00314170 NA coding upstream 106460 313757 ~ 314670 (+)
CI01000058_00241253_00245763 NA coding upstream 175023 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 314406 104333 ~ 106724 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 13383 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 45103 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 95620 517150 ~ 528807 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding downstream 107655 529185 ~ 544027 (+)
CI01000058_00548398_00567030 NWD1 coding downstream 126297 547827 ~ 567172 (+)
G247309 NA non-coding upstream 88603 332262 ~ 332527 (+)
G247300 NA non-coding upstream 104787 315979 ~ 316343 (+)
G247257 NA non-coding upstream 192596 227897 ~ 228534 (+)
G247192 NA non-coding upstream 277539 142755 ~ 143591 (+)
G247176 NA non-coding upstream 359004 61870 ~ 62126 (+)
G247293 NA non-coding downstream 4228 425758 ~ 426095 (+)
G247316 NA non-coding downstream 5717 427247 ~ 427462 (+)
G247317 NA non-coding downstream 6914 428444 ~ 433463 (+)
G247323 NA non-coding downstream 42209 463739 ~ 463981 (+)
CI01000058_00592498_00596709 NA other downstream 170801 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 807079 1278592 ~ 1289874 (+)
G247940 NA other downstream 1031467 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1374183 1794468 ~ 1800421 (+)

Expression


Co-expression Network