G247316


Basic Information

Item Value
gene id G247316
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 427247 ~ 427462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280695
TGGTTGCCAGAGCATTGTTAAGTGAATGAAAAGTAATAGCACATTTCTCCTCAACAAGCCACATGGTTTGAGTTATCCTTCATGTTCATTAAAATTAATTGAAAAGTGGAGTAGATTGCATATTTTTACATTTTGGATCTATTATATGTTGACATATGTTTTTGAAAAAAACACCACAGAGTGTGACTGTCACATGTATGCTCTGTTTTGGTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280695 True 216 lncRNA 0.33 1 427247 427462

Neighbor

gene id symbol gene type direction distance location
CI01000058_00382692_00395743 NA coding upstream 31473 382692 ~ 395774 (+)
CI01000058_00333202_00355871 PANK4 coding upstream 71372 333040 ~ 355875 (+)
CI01000058_00313907_00314170 NA coding upstream 112577 313757 ~ 314670 (+)
CI01000058_00241253_00245763 NA coding upstream 181140 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 320523 104333 ~ 106724 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 7451 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 39171 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 89688 517150 ~ 528807 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding downstream 101723 529185 ~ 544027 (+)
CI01000058_00548398_00567030 NWD1 coding downstream 120365 547827 ~ 567172 (+)
G247293 NA non-coding upstream 1152 425758 ~ 426095 (+)
G247314 NA non-coding upstream 5717 421130 ~ 421530 (+)
G247309 NA non-coding upstream 94720 332262 ~ 332527 (+)
G247300 NA non-coding upstream 110904 315979 ~ 316343 (+)
G247257 NA non-coding upstream 198713 227897 ~ 228534 (+)
G247317 NA non-coding downstream 982 428444 ~ 433463 (+)
G247323 NA non-coding downstream 36277 463739 ~ 463981 (+)
G247342 NA non-coding downstream 61704 489166 ~ 489403 (+)
G247337 NA non-coding downstream 78846 506308 ~ 507353 (+)
CI01000058_00592498_00596709 NA other downstream 164869 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 801147 1278592 ~ 1289874 (+)
G247940 NA other downstream 1025535 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1368251 1794468 ~ 1800421 (+)

Expression


Co-expression Network