G247317


Basic Information

Item Value
gene id G247317
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 428444 ~ 433463 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280700
ATGTAATGATGGGTCGACAGAATGTGGATCCATTTGCAGCTAGTTTATTAAAAGTACCTACAGAGTAGACAGGGCAAAGGCAGAGGCATAAACAGTAACAGGCAATGGTCGAGGCAGGCGGCAGACAAACAGAATCAGGGTACAGGCAAGGATCAGGGCAGGCAGCAAAACAATCACAGTCCAGGAAACAGGCAAAGATCAGGGTCGGCAGCAAAGGGTCGCAGGGAATAAACAGTCCAATCGATAACAGGTAAACAGTCCACAGAAAAACGCTCAGAAATGATCACCAAGGCAAATCAAGACTTCGCGATGTGTGAGTGTGTGTGTGTGTGTCTTAAATAGTGTGAGTGTGATGCGGTGCAGGTGTGTGTGCAATCAGTCCCAGGAATGAGGGCCCATGGGAAACGTAGTCCGAATGAGAACTGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280700 True 429 lncRNA 0.48 2 428444 433463

Neighbor

gene id symbol gene type direction distance location
CI01000058_00382692_00395743 NA coding upstream 32670 382692 ~ 395774 (+)
CI01000058_00333202_00355871 PANK4 coding upstream 72569 333040 ~ 355875 (+)
CI01000058_00313907_00314170 NA coding upstream 113774 313757 ~ 314670 (+)
CI01000058_00241253_00245763 NA coding upstream 182337 241253 ~ 246107 (+)
CI01000058_00104333_00105839 NA coding upstream 321720 104333 ~ 106724 (+)
CI01000058_00435196_00437830 AGTRAP coding downstream 1450 434913 ~ 455744 (+)
CI01000058_00466891_00481927 CTBS coding downstream 33170 466633 ~ 482017 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 83687 517150 ~ 528807 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding downstream 95722 529185 ~ 544027 (+)
CI01000058_00548398_00567030 NWD1 coding downstream 114364 547827 ~ 567172 (+)
G247316 NA non-coding upstream 982 427247 ~ 427462 (+)
G247293 NA non-coding upstream 2349 425758 ~ 426095 (+)
G247314 NA non-coding upstream 6914 421130 ~ 421530 (+)
G247309 NA non-coding upstream 95917 332262 ~ 332527 (+)
G247300 NA non-coding upstream 112101 315979 ~ 316343 (+)
G247323 NA non-coding downstream 30276 463739 ~ 463981 (+)
G247342 NA non-coding downstream 55703 489166 ~ 489403 (+)
G247337 NA non-coding downstream 72845 506308 ~ 507353 (+)
G247563 NA non-coding downstream 249763 683226 ~ 683442 (+)
CI01000058_00592498_00596709 NA other downstream 158868 592331 ~ 597171 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 795146 1278592 ~ 1289874 (+)
G247940 NA other downstream 1019534 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1362250 1794468 ~ 1800421 (+)

Expression


Co-expression Network