G247337


Basic Information

Item Value
gene id G247337
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 506308 ~ 507353 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU280721
CATTCTCGTGTGTAATTGTCATGACCCCTGTTCTGTGTCTTTTGTTTTGTATGGACTTTTATGTTGAAATGTATTCTCTGTTCTCATTGTATCTGTGCACACTTCCTGTGTTTGGTATGTGTTTCTCCTTGGGTGCTTCTCAATTCTTATTTGTGCATCCTTGTTTCCTTTCCTCGCATCTTAGCTCCACCCCTTTAGGATGCAACGGAAGGACACAAGGAAAAGATGGGAGGACAGAGGAATTTAATCAAGTGAAATGATATCCTCGCTCCCTTTATCGTCACTTCAAAGCATCATCAGCTGCACTCGAGGGATCTACCCATATGTTGTTAAAGTTTGGTTATTTAAAAAATTATAATAAATATTAATAAGGAAAGATGCCCCATTAAAATATGTGAGATGTAAAGTTTATTTAAACTGCAAAAGTAAACCATACATTTAAATGATTGTGACAGATATGAAGGGGGAGGAGAATTTATACGTGCCTCACGTTTCTCGACGAGAAAGACTTCCGCAAAGGATACACCTGTGTGTCCTCGCTCATGACTCCTCAGGAAGCTTCCTCACTCCTCGTTCCTCGCCTCCTCGCGGTGCAATTAGAGAATTGAGATGTCCTACAAGATGGCTGAGCTTGATCGGTTTCCGGGTCATAGGATGGAGGACGGAGGAGCGAGGAAACAAGGAGGGATATTGAGAAGCACCCCTTGTCATATTAGTTACTATAGTTACCATTAGTGTTGTAGTACTCAAGACCGGTCTTTGTCTTGAGACCAGTCTTAAGACCATTTTTTGAAGGTCTTGGTCTCAGACTAAAAGGACTCTGGGTTTTATTTCAAGACCACTCAAGACCACAACTGCGGGGATATCGCTAACTTGCTGTTGCATTGTCTGATTTCTTTGTTAACATCATTAATTTGATTGGATATAAAACTTCCTGCTTCAAATGCAATCAATAACTTATTTCATTTATTTTGTTACTGTTGTGCTGGGTCAGAAATCAACAAGGGATTGTGTCAAAAATGTCACCAAAATTAATACAAATGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280721 True 1046 lncRNA 0.40 1 506308 507353

Neighbor

gene id symbol gene type direction distance location
CI01000058_00466891_00481927 CTBS coding upstream 24291 466633 ~ 482017 (+)
CI01000058_00435196_00437830 AGTRAP coding upstream 67898 434913 ~ 455744 (+)
CI01000058_00382692_00395743 NA coding upstream 110534 382692 ~ 395774 (+)
CI01000058_00333202_00355871 PANK4 coding upstream 150433 333040 ~ 355875 (+)
CI01000058_00313907_00314170 NA coding upstream 191638 313757 ~ 314670 (+)
CI01000058_00517452_00527181 TMEM38A coding downstream 9797 517150 ~ 528807 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding downstream 21832 529185 ~ 544027 (+)
CI01000058_00548398_00567030 NWD1 coding downstream 40474 547827 ~ 567172 (+)
CI01000058_00592498_00596709 NA coding downstream 85111 592331 ~ 597171 (+)
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding downstream 144982 652335 ~ 654903 (+)
G247342 NA non-coding upstream 16905 489166 ~ 489403 (+)
G247323 NA non-coding upstream 42327 463739 ~ 463981 (+)
G247317 NA non-coding upstream 72845 428444 ~ 433463 (+)
G247316 NA non-coding upstream 78846 427247 ~ 427462 (+)
G247563 NA non-coding downstream 175873 683226 ~ 683442 (+)
G247578 NA non-coding downstream 209157 716510 ~ 716777 (+)
G247617 NA non-coding downstream 220086 727439 ~ 727828 (+)
G247641 NA non-coding downstream 233495 740848 ~ 754686 (+)
G247653 NA non-coding downstream 256242 763595 ~ 763815 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 721256 1278592 ~ 1289874 (+)
G247940 NA other downstream 945644 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 1288360 1794468 ~ 1800421 (+)
G250039 NA other downstream 4187055 4694408 ~ 4697161 (+)

Expression


Co-expression Network