G247683


Basic Information

Item Value
gene id G247683
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 806885 ~ 807312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281140
GGCTGATTGTTCCTTTTAAAGATCACAGTTTTCCTTTCCGTATACCTCACAAAGAAGGAATTTATTTAAAATTCATTTTTAGTTGTGACGGAAAAAGAGAGAGAGAAAGAGAGTGAGTGAGAGAAACTAATTAAACCACAATAAATTAATAGTAGAGGAAATTGTCATAATTTCTCATAATCATAGAAGTCCACCATGCGTTTGGTGCTTTATCAAATAAAATAAAAAAAACAAAAATTGTCACCCATTAACTGAAAAAAAAAAAAAAAAAAATCACAAGTCTCCACAGAGTGTGTTAATTTACTCTCACCCCTAACGGCTGACCCTCTGAATAGACAGTTAAATTACCTCCACTGCCCGCTGCCCCACTCTCTTTGATCCAAATAATTGGACATTTGAATAAAGCAGAGAGACTTTGCTAATTCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281140 True 428 lncRNA 0.34 1 806885 807312

Neighbor

gene id symbol gene type direction distance location
CI01000058_00728698_00738214 NA coding upstream 67947 728520 ~ 738938 (+)
CI01000058_00652594_00653181 DIRAS1A, DIRAS1B, DIRAS1, DIRAS2 coding upstream 151982 652335 ~ 654903 (+)
CI01000058_00592498_00596709 NA coding upstream 210072 592331 ~ 597171 (+)
CI01000058_00548398_00567030 NWD1 coding upstream 239713 547827 ~ 567172 (+)
CI01000058_00529237_00544012 MEPD, THOP1 coding upstream 262858 529185 ~ 544027 (+)
CI01000058_00847992_00862210 NA coding downstream 39985 847297 ~ 862430 (+)
CI01000058_00870909_00930600 ADGRL2A, ADGRL2 coding downstream 63597 870909 ~ 930600 (+)
CI01000058_01239590_01240099 NA coding downstream 432190 1239502 ~ 1240300 (+)
CI01000058_01248234_01262911 PRKACBA, PRKACB coding downstream 440922 1248234 ~ 1263318 (+)
CI01000058_01266712_01271962 SAMD13 coding downstream 458441 1265753 ~ 1274437 (+)
G247672 NA non-coding upstream 12572 794088 ~ 794313 (+)
G247667 NA non-coding upstream 16389 790279 ~ 790496 (+)
G247663 NA non-coding upstream 21645 785025 ~ 785240 (+)
G247653 NA non-coding upstream 43070 763595 ~ 763815 (+)
G247641 NA non-coding upstream 52199 740848 ~ 754686 (+)
G247639 NA non-coding downstream 123692 931004 ~ 932179 (+)
G247696 NA non-coding downstream 128903 936215 ~ 936445 (+)
G247705 NA non-coding downstream 159836 967148 ~ 967373 (+)
G247711 NA non-coding downstream 163327 970639 ~ 970871 (+)
G247723 NA non-coding downstream 199413 1006725 ~ 1007170 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 351141 434913 ~ 455744 (+)
CI01000058_01280337_01289153 DNASE2B other downstream 421297 1278592 ~ 1289874 (+)
G247940 NA other downstream 645685 1452997 ~ 1456447 (+)
CI01000058_01794468_01800421 KISS1 other downstream 988401 1794468 ~ 1800421 (+)
G250039 NA other downstream 3887096 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 4019064 4864571 ~ 4888216 (+)

Expression


Co-expression Network