Gene
RNA
| Item | Value |
|---|---|
| gene id | G248052 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000058 |
| NCBI id | null |
| chromosome length | 5213219 |
| location | 1467637 ~ 1503560 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU281548 | False | 4861 | lncRNA | 0.45 | 20 | 1467637 | 1485244 |
| TU281549 | False | 1147 | lncRNA | 0.36 | 3 | 1476085 | 1477545 |
| TU281551 | False | 2521 | lncRNA | 0.50 | 16 | 1477551 | 1503560 |
| TU281550 | True | 1609 | lncRNA | 0.47 | 8 | 1483384 | 1503560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000058_01431719_01434294 | CHIA.2 | coding | upstream | 33124 | 1431559 ~ 1434513 (+) |
| CI01000058_01391493_01394283 | NA | coding | upstream | 73218 | 1391493 ~ 1394419 (+) |
| CI01000058_01384467_01388274 | NA | coding | upstream | 78710 | 1384204 ~ 1388927 (+) |
| CI01000058_01364846_01374544 | NA | coding | upstream | 93053 | 1364846 ~ 1374584 (+) |
| CI01000058_01348684_01352173 | NA | coding | upstream | 115049 | 1348684 ~ 1352588 (+) |
| CI01000058_01580247_01591754 | NA | coding | downstream | 76103 | 1579663 ~ 1592253 (+) |
| CI01000058_01625351_01664692 | PIK3C2B | coding | downstream | 121791 | 1625351 ~ 1665794 (+) |
| CI01000058_01740599_01784355 | PLEKHA6 | coding | downstream | 237039 | 1740599 ~ 1784676 (+) |
| CI01000058_01794468_01800421 | KISS1 | coding | downstream | 290908 | 1794468 ~ 1800421 (+) |
| CI01000058_01838039_01842964 | NA | coding | downstream | 334479 | 1838039 ~ 1843230 (+) |
| G247934 | NA | non-coding | upstream | 1750 | 1462283 ~ 1465887 (+) |
| G248036 | NA | non-coding | upstream | 57753 | 1409102 ~ 1409884 (+) |
| G248035 | NA | non-coding | upstream | 60631 | 1406656 ~ 1407006 (+) |
| G248031 | NA | non-coding | upstream | 63981 | 1403384 ~ 1403656 (+) |
| G248027 | NA | non-coding | upstream | 66369 | 1400988 ~ 1401268 (+) |
| G248103 | NA | non-coding | downstream | 113016 | 1616576 ~ 1617014 (+) |
| G248104 | NA | non-coding | downstream | 113791 | 1617351 ~ 1617920 (+) |
| G248112 | NA | non-coding | downstream | 173297 | 1676857 ~ 1677153 (+) |
| G247948 | NA | non-coding | downstream | 183219 | 1686779 ~ 1706383 (+) |
| G247947 | NA | non-coding | downstream | 210724 | 1714284 ~ 1733492 (+) |
| G247940 | NA | other | upstream | 11190 | 1452997 ~ 1456447 (+) |
| CI01000058_01280337_01289153 | DNASE2B | other | upstream | 179367 | 1278592 ~ 1289874 (+) |
| CI01000058_00592498_00596709 | NA | other | upstream | 870466 | 592331 ~ 597171 (+) |
| CI01000058_00435196_00437830 | AGTRAP | other | upstream | 1011893 | 434913 ~ 455744 (+) |
| G250039 | NA | other | downstream | 3190848 | 4694408 ~ 4697161 (+) |
| CI01000058_04864571_04888198 | NA | other | downstream | 3322816 | 4864571 ~ 4888216 (+) |
