G248104


Basic Information

Item Value
gene id G248104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 1617351 ~ 1617920 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281609
TCCGAAATGAGGCACAAGAGACGCGCATTTAGGTCTGCGCATGCGCATTAGCTTGATCCAGCCTAAATACTGTTTTTTTGGCATGATTTGAGCGTTTGGAAAAAAAATTATGAGACAGTTGTTGTCAGATTTCATTGGTGATTTCAAATATGAAATTTAATCGAAAGCTTGGCAAACAGCTTTGGAGAATTTGATGTTTCCCCATTCAAAGAGATAGGAGCTGCATGATGCCCAGGATGCCCGAGAGGCGTTTCAAAGATGGCCGCCGAGTGAAATGACTTGTCTTAAAGGGACTTTGACTGTATTCAAATGTTATAAATATAAAAATACCACATTTTGAAATTTAACTGCAGTATGTCAATTTAGTTTATTTGTGTGTGCTGCGCTCATAGACTTTAGAAAATGGCGCTCATTTGTTTGATTTCTCCTCGAGAAGCTGCGCAAGCCTCAAAAGTTTAAGGTCCTTGCACCCTGACCGAGTCCGAAACTCGTATTCGTTTTTTCATATAATCGTCATTTGGTGGCTCTCAGTTGTCAAAAACACCCCTCAAAATATTTGATACGGATGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281609 True 570 lncRNA 0.40 1 1617351 1617920

Neighbor

gene id symbol gene type direction distance location
CI01000058_01580247_01591754 NA coding upstream 25098 1579663 ~ 1592253 (+)
CI01000058_01496481_01498802 NA coding upstream 117541 1494870 ~ 1499810 (+)
CI01000058_01431719_01434294 CHIA.2 coding upstream 182838 1431559 ~ 1434513 (+)
CI01000058_01391493_01394283 NA coding upstream 222932 1391493 ~ 1394419 (+)
CI01000058_01384467_01388274 NA coding upstream 228424 1384204 ~ 1388927 (+)
CI01000058_01625351_01664692 PIK3C2B coding downstream 7431 1625351 ~ 1665794 (+)
CI01000058_01740599_01784355 PLEKHA6 coding downstream 122679 1740599 ~ 1784676 (+)
CI01000058_01794468_01800421 KISS1 coding downstream 176548 1794468 ~ 1800421 (+)
CI01000058_01838039_01842964 NA coding downstream 220119 1838039 ~ 1843230 (+)
CI01000058_01957358_02009847 ATP2B4 coding downstream 339438 1957358 ~ 2009847 (+)
G248103 NA non-coding upstream 337 1616576 ~ 1617014 (+)
G247993 NA non-coding upstream 66501 1492179 ~ 1550850 (+)
G248052 NA non-coding upstream 113791 1467637 ~ 1503560 (+)
G247934 NA non-coding upstream 151464 1462283 ~ 1465887 (+)
G248036 NA non-coding upstream 207467 1409102 ~ 1409884 (+)
G248112 NA non-coding downstream 58937 1676857 ~ 1677153 (+)
G247948 NA non-coding downstream 68859 1686779 ~ 1706383 (+)
G247947 NA non-coding downstream 96364 1714284 ~ 1733492 (+)
G247975 NA non-coding downstream 129850 1747770 ~ 1752339 (+)
G248118 NA non-coding downstream 205869 1823789 ~ 1823990 (+)
G247940 NA other upstream 160904 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 329081 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 1020180 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 1161607 434913 ~ 455744 (+)
G250039 NA other downstream 3076488 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 3208456 4864571 ~ 4888216 (+)

Expression


Co-expression Network