XLOC_010134



Basic Information


Item Value
gene id XLOC_010134
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 38731787 ~ 38733942 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021739
GGTCCATTGATCAGTTAATGCTTTTGACCTCAAGTTTGAAACAAAAAGAGGTCTATAATAATGCATGGGAAATGGCAGACGGAGGTGACTAGGAGGCACTTGGACGTCTGCTGTGCATTACACACTTAAGCCTCTGCGGATCCTCCCCAGAGCAACGCAATGATCAGAGGGAGCCTAAGAAGGTGAGGACAGAGGGAGTCTCCCCATGGTTCCCCGTTGAATTCCCTGGGTGCATGGAGTTGCATTGAAACAGGGTATTTCCCTTCGCCACGTCTGGTTTATTGAAGAGGCTGCGAGGACTGAAGATGAATGAGACTGATTGTTAACCCTGCGGCCTTGCCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021739 True 343 lncRNA 0.50 3 38731787 38733942

Neighbor


gene id symbol gene type direction distance location
XLOC_010133 emc2 coding upstream 2181 38659475 ~ 38729606 (+)
XLOC_010132 cd83 coding upstream 334428 38394371 ~ 38397359 (+)
XLOC_010131 zgc:113232 coding upstream 341904 38360002 ~ 38389883 (+)
XLOC_010130 elp6 coding upstream 372150 38350704 ~ 38359637 (+)
XLOC_010129 gabpb2b coding upstream 384231 38337783 ~ 38347556 (+)
XLOC_010135 trhra coding downstream 84922 38818864 ~ 38826777 (+)
XLOC_010136 eny2 coding downstream 206816 38940758 ~ 38943685 (+)
XLOC_010137 sybu coding downstream 412754 39146696 ~ 39168840 (+)
XLOC_010138 zdhhc3a coding downstream 462785 39196727 ~ 39233451 (+)
XLOC_010139 zgc:77056 coding downstream 508397 39242339 ~ 39246079 (+)
XLOC_010122 CT025591.1 non-coding upstream 710653 38021019 ~ 38021134 (+)
XLOC_010119 BX294107.1 non-coding upstream 960187 37771483 ~ 37771600 (+)
XLOC_010118 NA non-coding upstream 1018150 37713264 ~ 37713637 (+)
XLOC_010117 NA non-coding upstream 1071176 37659520 ~ 37660611 (+)
XLOC_010116 NA non-coding upstream 1089924 37633447 ~ 37641863 (+)
XLOC_010142 NA non-coding downstream 890182 39624124 ~ 39627370 (+)
XLOC_010143 NA non-coding downstream 893771 39627713 ~ 39628196 (+)
XLOC_010144 NA non-coding downstream 897668 39631610 ~ 39632068 (+)
XLOC_010145 NA non-coding downstream 1123243 39857185 ~ 39901940 (+)
XLOC_010146 NA non-coding downstream 1218415 39952357 ~ 39966375 (+)

Expression



Co-expression Network