XLOC_010136 (eny2)


Basic Information

Item Value
gene id XLOC_010136
gene name eny2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 38940758 ~ 38943685 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020113
ACAACAGCAGAGAGAAAAGCGCTTACACGCCGATGAGAACATTATGCTCATATTCATTAGTGTCTGACTAATATGAGTAAAGAATCACAAATGAGGGCCGCCATTAACCAGAAGTTAATTGAGATGGGTGAGAGGGAGAGgtTAAAGGAGTTGCTTCGAGCCAAGCTCATCGAGTGTGGTTGGAGAGATCAACTCAAAGCACTCTGCAAAGAGGTGATCAAGGAGAAAGGTATAGAAAATGTTACCGTGGAAGACTTGGTTGCTGGAGTTACTCCCAAAGGAAGAGCCCTGGTGCCTGACAGTGTAAAGAAGGAGCTGCTTCAGAGAATAAGAGCCTTTCTCGCACAGCACTCTACATGATGCGCAGTATTTCTGAAAGCGTCTGTCATTTTTGTATTGACATTATGCCAATAGCAATGCCAGAAAGTTGAACTGTTTTGTGGTGTGATTTCACTCTTCGTCTTTTTGTTACTCCCAATAAAGGTTGATCATGTTTGTACATAA
>TCONS_00020114
GCCGATGAGAACATTATGCTCATATTCATTAGTGTCTGGTACGTTTATCACAAATCGCATAcggttaaattataatttatactAGTATTGAATTTGTACGGCGCTATAGACACGGGTCATAAAAAACAACCACCTGTGCTAAAAATCGTTACAGTGATGAAAAATATTCTACATCCTGTGTATTTCCCCTCTAAAGTCCGTCtagttgttgtttgtttatgcttaatgtaattatgaTGCAAGGTGAAAATTGTGTTTTGTGAGTGGCCAAGTTAAGACCTGCAGTCTTTGGCACTACAGTTCGCCATGTCTCTTCATTTTAACCTCTTATTTCAGACTAATATGAGTAAAGAATCACAAATGAGGGCCGCCATTAACCAGAAGTTAATTGAGATGGGTGAGAGGGAGAGgtTAAAGGAGTTGCTTCGAGCCAAGCTCATCGAGTGTGGTTGGAGAGATCAACTCAAAGCACTCTGCAAAGAGGTGATCAAGGAGAAAGGTATAGAAAATGTTACCGTGGAAGACTTGGTTGCTGGAGTTACTCCCAAAGGAAGAGCCCTGGTGCCTGACAGTGTAAAGAAGGAGCTGCTTCAGAGAATAAGAGCCTTTCTCGCACAGCACTCTACATGATGCGCAGTATTTCTGAAAGCGTCTGTCATTTTTGTATTGACATTATGCCAATAGCAATGCCAGAAAGTTGAACTGTTTTGTGGTGTGATTTCACTCTTCGTCTTTTTGTTACTCCCAATAAAGGTTGATCATGTTTGTAC

Function

symbol description
eny2 Predicted to enable chromatin binding activity and transcription coactivator activity. Predicted to be involved in histone deubiquitination; poly(A)+ mRNA export from nucleus; and regulation of transcription, DNA-templated. Predicted to act upstream of or within chromatin organization; mRNA export from nucleus; and protein transport. Predicted to be located in nucleus. Predicted to be part of DUBm complex and SAGA complex. Orthologous to human ENY2 (ENY2 transcription and export complex 2 subunit).

GO:

id name namespace
GO:0006325 chromatin organization biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0006368 transcription elongation from RNA polymerase II promoter biological_process
GO:0006406 mRNA export from nucleus biological_process
GO:0015031 protein transport biological_process
GO:0016578 histone deubiquitination biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0051028 mRNA transport biological_process
GO:0016973 poly(A)+ mRNA export from nucleus biological_process
GO:0071819 DUBm complex cellular_component
GO:0000124 SAGA complex cellular_component
GO:0005634 nucleus cellular_component
GO:0070390 transcription export complex 2 cellular_component
GO:0005643 nuclear pore cellular_component
GO:0003682 chromatin binding molecular_function
GO:0003713 transcription coactivator activity molecular_function

KEGG:

id description
ko03021 Transcription machinery
ko03019 Messenger RNA biogenesis
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-040718-124 Predicted to enable chromatin binding activity and transcription coactivator activity. Predicted to be involved in histone deubiquitination; poly(A)+ mRNA export from nucleus; and regulation of transcription, DNA-templated. Predicted to act upstream of or within chromatin organization; mRNA export from nucleus; and protein transport. Predicted to be located in nucleus. Predicted to be part of DUBm complex and SAGA complex. Orthologous to human ENY2 (ENY2 transcription and export complex 2 subunit).

Ensembl:

ensembl_id ENSDARG00000070046

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020113 False 504 mRNA 0.43 5 38940758 38943685
TCONS_00020114 True 770 mRNA 0.40 4 38940786 38943681

Neighbor

gene id symbol gene type direction distance location
XLOC_010135 trhra coding upstream 113981 38818864 ~ 38826777 (+)
XLOC_010134 NA coding upstream 206816 38731787 ~ 38733942 (+)
XLOC_010133 emc2 coding upstream 211152 38659475 ~ 38729606 (+)
XLOC_010132 cd83 coding upstream 543399 38394371 ~ 38397359 (+)
XLOC_010131 zgc:113232 coding upstream 550875 38360002 ~ 38389883 (+)
XLOC_010137 sybu coding downstream 203011 39146696 ~ 39168840 (+)
XLOC_010138 zdhhc3a coding downstream 253042 39196727 ~ 39233451 (+)
XLOC_010139 zgc:77056 coding downstream 298654 39242339 ~ 39246079 (+)
XLOC_010140 osbpl10b coding downstream 327438 39271123 ~ 39386073 (+)
XLOC_010141 CR855318.1 coding downstream 541923 39485608 ~ 39583668 (+)
XLOC_010122 CT025591.1 non-coding upstream 919624 38021019 ~ 38021134 (+)
XLOC_010119 BX294107.1 non-coding upstream 1169158 37771483 ~ 37771600 (+)
XLOC_010118 NA non-coding upstream 1227121 37713264 ~ 37713637 (+)
XLOC_010117 NA non-coding upstream 1280147 37659520 ~ 37660611 (+)
XLOC_010142 NA non-coding downstream 680439 39624124 ~ 39627370 (+)
XLOC_010143 NA non-coding downstream 684028 39627713 ~ 39628196 (+)
XLOC_010144 NA non-coding downstream 687925 39631610 ~ 39632068 (+)
XLOC_010145 NA non-coding downstream 913500 39857185 ~ 39901940 (+)
XLOC_010146 NA non-coding downstream 1008672 39952357 ~ 39966375 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_01341525_01342959 ENY2, ENY2.L coding CI01000016 null 1341347 ~ 1343558 (-)
bowfin (Amia calva) AMCG00003570 NA misc CM030121.1 CM030121.1 9777508 ~ 9781756 (+)