G248384


Basic Information

Item Value
gene id G248384
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 2416253 ~ 2416481 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU281913
AGAAAGTGCAATCTATTAATCAAAACTGTCTGGACATGACGGCAACTTTCTTCTTTTTCAGCTAAGCAGAAACAGGACAGTAGAAATTTTATAAACTGTGTTGATGATGATCATGATAACAATTTCTAAATCACTACTCAAATTGAACATGTAAAATACGTGAAAGAACAGAGTTAAAAAGGATGTTGAATGAAACAAATTAACATTTGTTCTTTTGCGTGTTTCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281913 True 229 lncRNA 0.31 1 2416253 2416481

Neighbor

gene id symbol gene type direction distance location
CI01000058_02379628_02392648 NA coding upstream 23473 2378584 ~ 2392780 (+)
CI01000058_02348646_02354404 TMEM183A coding upstream 61168 2348615 ~ 2355085 (+)
CI01000058_02227590_02229507 MYOG coding upstream 186232 2227418 ~ 2230021 (+)
CI01000058_02052152_02085378 NA coding upstream 330798 2051963 ~ 2085455 (+)
CI01000058_02028188_02037502 MDM4 coding upstream 378625 2028149 ~ 2037628 (+)
CI01000058_02578534_02589495 NA coding downstream 161580 2578061 ~ 2590541 (+)
CI01000058_02592534_02600835 NA coding downstream 174712 2591193 ~ 2601755 (+)
CI01000058_02629861_02631891 NA coding downstream 213209 2629690 ~ 2632294 (+)
CI01000058_02635467_02636768 NA coding downstream 218695 2635176 ~ 2636985 (+)
CI01000058_02650808_02653235 NA coding downstream 233955 2650436 ~ 2653371 (+)
G248374 NA non-coding upstream 14130 2401863 ~ 2402123 (+)
G248373 NA non-coding upstream 15611 2400385 ~ 2400642 (+)
G248372 NA non-coding upstream 17362 2398686 ~ 2398891 (+)
G248356 NA non-coding upstream 94341 2317218 ~ 2321912 (+)
G248303 NA non-coding upstream 178295 2236910 ~ 2237958 (+)
G248404 NA non-coding downstream 39206 2455687 ~ 2456585 (+)
G248405 NA non-coding downstream 42566 2459047 ~ 2459397 (+)
G248406 NA non-coding downstream 44435 2460916 ~ 2461548 (+)
G248432 NA non-coding downstream 83629 2500110 ~ 2500317 (+)
CI01000058_01794468_01800421 KISS1 other upstream 618521 1794468 ~ 1800421 (+)
G247940 NA other upstream 959806 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 1127983 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 1819082 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 1960509 434913 ~ 455744 (+)
G250039 NA other downstream 2277927 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 2409895 4864571 ~ 4888216 (+)

Expression


Co-expression Network