XLOC_010139 (zgc:77056)


Basic Information

Item Value
gene id XLOC_010139
gene name zgc:77056
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 39242339 ~ 39246079 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020120
GTTTACTGTCCAGTGTTTGCGAAACATTAAGCGCATTTACAGTTTATCAGGCTGATTTTAACTAAGGCACAATGAGCAAAAAGGGCAACGTATCATGGGTGAAGCCAGCCGAACCATCTTTCCTGAAGAAATTCAAGAATGATGTTGGTTTCAAAGAAGGGCCGACAGTGGAGACCAAAAAGGAGCAGATGCCACAGTGTGATGATGACAGCGGGGACAGTGACCGAGAAGATGAAATGCCGCAGGTTGTGGTCCTCAAAAAGGGGGATCTGAGTGCTGAAGAGGTTATGAAGATGAAAAAAGATTCAAAGGAGGAAAACACAGATGAACAGCCTCCATCTGATGGAAAGATCGTCTTTAAGAAGCCTGTCAAGCGCTCGTCTGATAAATTCGAAGGCATTACTGCCAGCTCTAGCAAGAAGAAGAAAAGCGAGGATGGTGAGAAGAAAGAGCCTAAAGCTGGCGTGAAAGTGAAGAACAGCAGTCTGCTATCATTTggaggtgatgatgatgatgaggaagaCTAGTTTGTCTGCGGTTTCTCTGAGTCAGATTGCAAAGACcaatctgctttttaaaaaaactatttcgtGTGTAGATGTTAATACATGTAAATAGATGTTTGTGGAAGTGAATTCATGCAGCTTATTTGTTAAAGCGTTTTGTTAAACATACGAGTCATTATGAGCCTCTTTTACATTAATTATACATTATACACATTTGATCATTAATGATATATTTTGATGGGTGTGTGaaccaaacattgggttaatCTGACATGCAAATATGATGGAATATTGAACATAGACAACATTTTAAAGAGGCTCTTTAATGTTTCATAGAAATGAAACTGTCCCGTTGAAAATGTTCAACAGGATGTACATATATGGCTTCTATAATGGAGCGGCGcaaatttgcttttattattcttttttttttttttaagcagatgGCACCCAAAATCCCTGATTCTGGGACTTTGGAGTTTTTATTATTACACATTGTGTTACATTCAGGGAAAACATGCATTtgggaataaaatgtttttacCACCA

Function

symbol description
zgc:77056 Orthologous to human KIAA1143 (KIAA1143).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5248 Orthologous to human KIAA1143 (KIAA1143).

Ensembl:

ensembl_id ENSDARG00000029615

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020120 True 1055 mRNA 0.38 3 39242339 39246079

Neighbor

gene id symbol gene type direction distance location
XLOC_010138 zdhhc3a coding upstream 8888 39196727 ~ 39233451 (+)
XLOC_010137 sybu coding upstream 73499 39146696 ~ 39168840 (+)
XLOC_010136 eny2 coding upstream 298654 38940758 ~ 38943685 (+)
XLOC_010135 trhra coding upstream 415562 38818864 ~ 38826777 (+)
XLOC_010134 NA coding upstream 508397 38731787 ~ 38733942 (+)
XLOC_010140 osbpl10b coding downstream 25044 39271123 ~ 39386073 (+)
XLOC_010141 CR855318.1 coding downstream 239529 39485608 ~ 39583668 (+)
XLOC_010142 NA coding downstream 378045 39624124 ~ 39627370 (+)
XLOC_010143 NA coding downstream 381634 39627713 ~ 39628196 (+)
XLOC_010144 NA coding downstream 385531 39631610 ~ 39632068 (+)
XLOC_010122 CT025591.1 non-coding upstream 1221205 38021019 ~ 38021134 (+)
XLOC_010119 BX294107.1 non-coding upstream 1470739 37771483 ~ 37771600 (+)
XLOC_010118 NA non-coding upstream 1528702 37713264 ~ 37713637 (+)
XLOC_010117 NA non-coding upstream 1581728 37659520 ~ 37660611 (+)
XLOC_010145 NA non-coding downstream 611106 39857185 ~ 39901940 (+)
XLOC_010146 NA non-coding downstream 706278 39952357 ~ 39966375 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G93442 NA non-coding CI01000016 null 1195710 ~ 1198373 (+)