XLOC_010144


Basic Information

Item Value
gene id XLOC_010144
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 39631610 ~ 39632068 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022000
ctcagcttgcatcgtAAAGGCTGCATCAAGATACTATCGGTTAATTTACACACGTTCCATCCTCTGAATATGTAGGTGCATTATGTGAATCACAAGGACCACGATTCAGCTTCTTCAATGCTCTACTGAAGAAAAATGATCACATCTTTGATGgctgaagGCGACGTTAAGGGATACATTTAGTGCATGCAGGAGGACTTTAATAAATCTTCCACAAGAGTTGCAGAAATTGCGAACAAAGTTACTTGCAGATTGTGTGCAGCCACAGAAACAAAAGTCGCTTCTGATGAGGTAAAAAGACGTTACAAGAGATGCTCCATCAGTACTGTTCAGCTGCTGCACAAGTAACTCAATTCCCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022000 True 359 lncRNA 0.42 2 39631610 39632068

Neighbor

gene id symbol gene type direction distance location
XLOC_010143 NA coding upstream 3414 39627713 ~ 39628196 (+)
XLOC_010142 NA coding upstream 4240 39624124 ~ 39627370 (+)
XLOC_010141 CR855318.1 coding upstream 47942 39485608 ~ 39583668 (+)
XLOC_010140 osbpl10b coding upstream 245537 39271123 ~ 39386073 (+)
XLOC_010139 zgc:77056 coding upstream 385531 39242339 ~ 39246079 (+)
XLOC_010145 NA coding downstream 225117 39857185 ~ 39901940 (+)
XLOC_010146 NA coding downstream 320289 39952357 ~ 39966375 (+)
XLOC_010147 NA coding downstream 340101 39972169 ~ 39977388 (+)
XLOC_010148 CT025588.2 coding downstream 379801 40011869 ~ 40011991 (+)
XLOC_010149 hint3 coding downstream 392815 40024883 ~ 40031779 (+)
XLOC_010134 NA non-coding upstream 897668 38731787 ~ 38733942 (+)
XLOC_010122 CT025591.1 non-coding upstream 1610476 38021019 ~ 38021134 (+)
XLOC_010119 BX294107.1 non-coding upstream 1860010 37771483 ~ 37771600 (+)
XLOC_010151 CT025588.3 non-coding downstream 443477 40075545 ~ 40082056 (+)

Expression


Co-expression Network