G249653


Basic Information

Item Value
gene id G249653
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 3657077 ~ 3657276 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283323
CGGCCCGGTCCTGCAGATTTGCCTTGTACAACATTAGGAAGATTAGACCCTTCCTATCTGAGCATTCCACACAAATTCTTGTCCAAGCTCTTGTTCTATCCAGACTGGACTATTGTAATGCTCTCTTGGAAGGCCTTCCAGCATGCACTGTCAAGCCTCTACAACTGATCCAGAATGCTGCAGCAAGACTAGTCTTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283323 True 200 lncRNA 0.47 1 3657077 3657276

Neighbor

gene id symbol gene type direction distance location
CI01000058_03644271_03645229 NA coding upstream 11848 3644271 ~ 3645229 (+)
CI01000058_03503653_03506062 NA coding upstream 150781 3503378 ~ 3506296 (+)
CI01000058_03201861_03220295 TAF4A, TAF4 coding upstream 436353 3200982 ~ 3220724 (+)
CI01000058_03181624_03193630 SLC6A14 coding upstream 461153 3181420 ~ 3195924 (+)
CI01000058_03169524_03172961 FMODA coding upstream 483375 3169045 ~ 3173702 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding downstream 189591 3846867 ~ 3850723 (+)
CI01000058_03889526_03896649 SYNPR coding downstream 232038 3889314 ~ 3896755 (+)
CI01000058_03915537_03946197 ATXN7 coding downstream 257646 3914922 ~ 3948073 (+)
CI01000058_03959155_03965275 SLC2A9L1 coding downstream 301879 3959155 ~ 3965598 (+)
CI01000058_04174884_04175951 RHOL coding downstream 517524 4174800 ~ 4176830 (+)
G249649 NA non-coding upstream 20015 3636812 ~ 3637062 (+)
G249647 NA non-coding upstream 28121 3628653 ~ 3628956 (+)
G249644 NA non-coding upstream 39135 3617711 ~ 3617942 (+)
G249642 NA non-coding upstream 55136 3601713 ~ 3601941 (+)
G249635 NA non-coding upstream 72121 3584635 ~ 3584956 (+)
G249660 NA non-coding downstream 22331 3679607 ~ 3679867 (+)
G249662 NA non-coding downstream 26200 3683476 ~ 3701072 (+)
G249664 NA non-coding downstream 49556 3706832 ~ 3710079 (+)
G249669 NA non-coding downstream 64001 3721277 ~ 3732184 (+)
G249674 NA non-coding downstream 85384 3742660 ~ 3743084 (+)
CI01000058_01794468_01800421 KISS1 other upstream 1859345 1794468 ~ 1800421 (+)
G247940 NA other upstream 2200630 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2368807 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3059906 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3201333 434913 ~ 455744 (+)
G250039 NA other downstream 1037132 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 1169100 4864571 ~ 4888216 (+)

Expression


Co-expression Network